| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_3700 |
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| Symbol | |
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| ID | 4668753 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax citrulli AAC00-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008752 |
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| Strand | - |
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| Start bp | 4076605 |
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| End bp | 4077858 |
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| Gene Length | 1254 bp |
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| Protein Length | 417 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 639824892 |
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| Product | LolC/E family lipoprotein releasing system, transmembrane protein |
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| Protein accession | YP_972022 |
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| Protein GI | 120612344 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG4591] ABC-type transport system, involved in lipoprotein release, permease component |
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| TIGRFAM ID | [TIGR02212] lipoprotein releasing system, transmembrane protein, LolC/E family |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.8164 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAACTTC CCTACGAACT GGCCCTGGGC TGGCGCTACA CCCGGGCCGG ACGCGCCACG
CGGCGCAACG GCTTCATCTC GTTCATCTCC GGCGTCTCCA TGCTGGGCAT CGCCCTCGGG
GTGGCCGCCC TCATCATCGT GCTCAGCGTG ATGAACGGCT TCCAGAAGGA AGTGCGCGAC
CGCATGCTCA GCGTGGTGTC CCACATCGAG ATCTTCGCGC CCCAGGGCGC CGCGCTGCCC
GATCCCGCGC TCACCATGGC TGAGACCCGC AAGAACCCCG AGGTGGTGGG CGCCGCGCCT
TTCGTCGGCT CGCAGGCGCT GATCGCCCGG GGCGAGGACA TGAAGGGCGC CCTGGTGCGC
GGCATCGATC CGGACCGCGA AGGCGAGGTG ACCGACCTGG CGGCCCGCAA TGCCGATGCC
GTGCGCACCC TCACCCCCGG CAGCTTCCAT GTGGTGCTGG GCGTGGAGCT GGCGCGGGCG
CTCGGCGTGC GCGTGGGCGA TCCCGTCACC CTCATCGCGC CGGGCGGGCA GGTCACGCCG
GCCGGCGTGG TGCCGCGCCT CAAGCAGATG ACCGTCTCGG GCATCTTCGA ATCCGGCCAC
TACGAATACG ACTCCGCCCT GGTGCTGCTG CACCATGCCG ACGCCGAGCG CATCTTCCGC
CTGGAAGGCC CCACCGGCAT CCGCCTCAAG CTGCGCGACC TGCACCAGGC GCCGGAGGTG
ACGCAGGAAC TCGCCCGGTC CCTCTCCGGC GACCTGCTGA TCCGCGACTG GACGCAGCAG
AACCGCACCT GGTTCGCCGC CGTCCAGCTC GAAAAGCGCA TGATGTTCAT CATCCTCACG
CTCATCGTGG CGGTGGCGGC CTTCAACCTG GTCTCCACCC TGGTGATGAC CGTGACCGAC
AAGCGCGCCG ACATCGCCAT CCTGCGCACC CTCGGCGCCA GCCCGCGCAG CATCATGGCC
GTGTTCGTGG TGCAGGGCGC GCTGGTGGGC GTGATCGGCA CGGCCTGCGG GCTGGCCCTC
GGCCTGCTCG TGGCCTTCAA CATCGACGTC ATCGTGCCGG CCATCGAGCA TGCGCTGCAC
GCCAGTTTCC TGCCCAAAGA CATCTACCTG ATCAGCAAGA TGCCCAGCGA CCCCCAGAGC
AGCGACATCA CCCCCATCGC GGTCATCTCC CTCGTGCTGG CCTTCGCGGC CACCCTGTAC
CCGAGCTGGC GCGCCAGCCG CGTGAATCCC GCGGAGGCAT TGCGTTATGA GTAG
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| Protein sequence | MQLPYELALG WRYTRAGRAT RRNGFISFIS GVSMLGIALG VAALIIVLSV MNGFQKEVRD
RMLSVVSHIE IFAPQGAALP DPALTMAETR KNPEVVGAAP FVGSQALIAR GEDMKGALVR
GIDPDREGEV TDLAARNADA VRTLTPGSFH VVLGVELARA LGVRVGDPVT LIAPGGQVTP
AGVVPRLKQM TVSGIFESGH YEYDSALVLL HHADAERIFR LEGPTGIRLK LRDLHQAPEV
TQELARSLSG DLLIRDWTQQ NRTWFAAVQL EKRMMFIILT LIVAVAAFNL VSTLVMTVTD
KRADIAILRT LGASPRSIMA VFVVQGALVG VIGTACGLAL GLLVAFNIDV IVPAIEHALH
ASFLPKDIYL ISKMPSDPQS SDITPIAVIS LVLAFAATLY PSWRASRVNP AEALRYE
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