| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_1761 |
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| Symbol | |
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| ID | 3671346 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiobacillus denitrificans ATCC 25259 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007404 |
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| Strand | - |
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| Start bp | 1854174 |
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| End bp | 1855418 |
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| Gene Length | 1245 bp |
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| Protein Length | 414 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637710453 |
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| Product | LolC/E family lipoprotein releasing system, transmembrane protein |
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| Protein accession | YP_315519 |
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| Protein GI | 74317779 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG4591] ABC-type transport system, involved in lipoprotein release, permease component |
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| TIGRFAM ID | [TIGR02212] lipoprotein releasing system, transmembrane protein, LolC/E family |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.293206 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGCTTCCTC TTGAGCTACT GGTCGGTCTG CGCTACACCC ACGCGAAGCG CCGTAACCAT
TTCATCTCCT TCATTTCCGT CGTCTCGATG GGCGGCATCG CACTCGGCGT GATGGCGCTG
ATCGTCGTGC TGTCGGTCAT GAACGGCTTC CAGGAGGAAC TGCGTGCGCG CATCCTCGGC
GTCGCGGCGC ATCTCGAGAT CAGCGGTCCG GGGGACCGTC TCGCCGACTG GCGTTCCGTG
CTGGCGCAGG CGCAGCGCAA CAAGGATGTC GTCTCCGGCG CGCCCTACGT CAATGCGCAG
GGCATGCTCG CCAACGGCGA CATGGTCCGC GGGGCGATCA TTCGCGGCAT CGTCCCCGGG
ATGGAAAACG CGGTGGCCGA TTTTTCGCGG CACATGAAAG CCGGGCGCCT GACCGACCTC
AAGCCCGGCG AATTTGGCAT CATCCTTGGG GGAGAACTGG CACGCGCGCT GAACGTCTTT
CCGGGTGACA AGCTCGTACT GCTCACGCCG CAGGGCAACA TCACGCCGGC CGGGGTCATG
CCGCGCGTCA AGCAGTTCAC GGTTACCGGC ATCTTCGAGG CCGGCATGTT CGAATACGAC
TCGGGCCTCG CCCTGATCCA TCTGCAGGAC GCGCAGAAGC TGCTGCGACT CGGGCAGGAC
GTGTCGGGCG TGCGCCTCAA GCTCGATGAA CTTTTCCGTG CGCCGTTCGT GACGCGCGAA
CTCGCGCAAA CGCTGACGGG CGATTACTAC CTCACCGACT GGACCCAGAG CCACGCCAAT
TTCTTTCGCG CCGTTGCGAT CGAGAAGCGC ATGATGTTCC TGATCCTGCT GTTGATCGTC
GCGGTTGCCG CGTTCAACAT CGTCTCCACG CTCGTGATGG CGGTCACCGA CAAACAGTCG
GATATCGCGA TCCTGCGCAC CCTCGGCGCC CGACCGGGGT CGGTCATGGC GATCTTCATC
GTGCAGGGCG CCTTCATCGG CGTGCTCGGC GCCGCGATCG GGGTGACGGG CGGTGTATTC
CTCGCGCTCA ATCTCGAGAC CGTCGTGCCA ATCATCGAGC GCATGGCAGG CATGGATCTC
TTCCCGGCCG ACGTCTACTA CATCAACGAG CTGCCCTCAA AGCTCGACTG GAGCGAGGTC
ACGCTGATCG GCGGCGTGTC CTTGCTGATC AGCCTGCTCG CGACGCTCTA TCCGAGCTGG
CGCGCGTCCC GCATCAACCC CGCCGAGGCG CTGCGCTATG AATGA
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| Protein sequence | MLPLELLVGL RYTHAKRRNH FISFISVVSM GGIALGVMAL IVVLSVMNGF QEELRARILG
VAAHLEISGP GDRLADWRSV LAQAQRNKDV VSGAPYVNAQ GMLANGDMVR GAIIRGIVPG
MENAVADFSR HMKAGRLTDL KPGEFGIILG GELARALNVF PGDKLVLLTP QGNITPAGVM
PRVKQFTVTG IFEAGMFEYD SGLALIHLQD AQKLLRLGQD VSGVRLKLDE LFRAPFVTRE
LAQTLTGDYY LTDWTQSHAN FFRAVAIEKR MMFLILLLIV AVAAFNIVST LVMAVTDKQS
DIAILRTLGA RPGSVMAIFI VQGAFIGVLG AAIGVTGGVF LALNLETVVP IIERMAGMDL
FPADVYYINE LPSKLDWSEV TLIGGVSLLI SLLATLYPSW RASRINPAEA LRYE
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