| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_2864 |
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| Symbol | |
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| ID | 4023362 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | - |
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| Start bp | 3191980 |
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| End bp | 3193248 |
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| Gene Length | 1269 bp |
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| Protein Length | 422 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637963062 |
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| Product | LolC/E family lipoprotein releasing system, transmembrane protein |
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| Protein accession | YP_569993 |
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| Protein GI | 91977334 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG4591] ABC-type transport system, involved in lipoprotein release, permease component |
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| TIGRFAM ID | [TIGR02212] lipoprotein releasing system, transmembrane protein, LolC/E family |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.998701 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.300269 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGAGC CTGTTCGAAC TCCTCCTTTC GCGCCATTCG AATGGCTCCT GTCCGGGCGC
TATTTGCGTG CGCGTCGCCG TGAGGGGTTC ATCTCGGTGA TTGCCGGCTT CTCGTTCCTC
GGCATCATGC TCGGCGTCGC CACGCTGATC ATCGTGATGG CGGTGATGAA CGGCTTCCGC
AAGGAATTGC TCGACAAGAT TCTCGGCCTC AACGGCCACC TGTTGGTGCA GCCGCTGGAA
AGCCCGCTGA CCGACTGGAA GGACGTCGCC GATCGCATCA GCGGCGTGCA GGGCATCAAG
CTCGCGGCGC CGGTGATCGA CGGCCAGGCG CTGGCGTCGT CGCCGTTCAA CGCCTCGGGG
GTGCTCGTGC GCGGCATTCG CGCCGACGAC CTCAACAATC TCTCCTCGAT CGCCAACCAC
ATCAAACAGG GCACGCTCGA AGGTTTCGAC GACGGGCAGG GCGTCGCGAT CGGACGCCGG
CTGGCCGATC AGCTTTCGCT GCACGCCGGC GACAGCGTCA CCCTGGTCGC GCCGCGCGGC
GCGGTGACGC CGATGGGCAC GACGCCCCGG ATCAAGCCGT ACAAGATCAC CGCGGTGTTC
GAGATCGGCA TGTCGGAGTA CGATTCGACC TTCGTGTTCA TGCCGCTCAA GGAAGCGCAG
GCCTATTTCA ACCGCAACAA CGACGTCACC GCGATCGAGG TCTACACCAC CAATCCGGAC
CGGATCGACG CGTTCCGCAA GAGCGTGACC GAGGCTGCAG GGCGGCCGGT GTTTCTGGTC
GACTGGCGGC AGCGCAACTC GACCTTCTTC AACGCGCTGC AGGTCGAACG TAACGTGATG
TTCCTGATCC TGACATTGAT TGTGCTGGTG GCGGCGCTGA ACATCGTTTC CGGCCTGATC
ATGCTGGTGA AGGACAAGGG CAGCGACATT GCGATCCTGC GTACCATGGG CGCGACTCAG
GGCTCGATCA TGCGCATTTT CCTGATCACC GGCGCAGCGA TCGGCGTGGT CGGCACGCTG
TGCGGCTTCG CCGTCGGTCT CCTGATCTGC ATGAACATCG AGTCGATCCG GCAGTTTCTG
TCCTGGGTCA CCAACACCGA ACTGTTCTCG CCGGAGCTGT ACTTCCTGTC CAAGCTGCCG
GCCGAGGTCG ATTTCGCCGA GACCAGCGCG GTGGTGATCA TGGCGCTGAC GCTGTCGTTC
CTCGCGACGC TGTATCCGTC GTGGCGCGCG GCACGGCTCG ATCCCGTCGA CGCGCTTCGG
TACGAGTGA
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| Protein sequence | MTEPVRTPPF APFEWLLSGR YLRARRREGF ISVIAGFSFL GIMLGVATLI IVMAVMNGFR
KELLDKILGL NGHLLVQPLE SPLTDWKDVA DRISGVQGIK LAAPVIDGQA LASSPFNASG
VLVRGIRADD LNNLSSIANH IKQGTLEGFD DGQGVAIGRR LADQLSLHAG DSVTLVAPRG
AVTPMGTTPR IKPYKITAVF EIGMSEYDST FVFMPLKEAQ AYFNRNNDVT AIEVYTTNPD
RIDAFRKSVT EAAGRPVFLV DWRQRNSTFF NALQVERNVM FLILTLIVLV AALNIVSGLI
MLVKDKGSDI AILRTMGATQ GSIMRIFLIT GAAIGVVGTL CGFAVGLLIC MNIESIRQFL
SWVTNTELFS PELYFLSKLP AEVDFAETSA VVIMALTLSF LATLYPSWRA ARLDPVDALR
YE
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