Gene Sfum_2498 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_2498 
Symbol 
ID4459213 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp3080861 
End bp3082003 
Gene Length1143 bp 
Protein Length380 aa 
Translation table11 
GC content62% 
IMG OID639703263 
Producthypothetical protein 
Protein accessionYP_846612 
Protein GI116749925 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG4591] ABC-type transport system, involved in lipoprotein release, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00553555 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGTTC GACTGGCCTG GCGTTCCATC TGGCGCAACC GGCGCAGAAC CCTCATCACC 
ATTGCCTCTC TCGCCCTGGG GCTGACCATT GCCATTTTCT TCATCGCCCT GTCGGAAGGC
GTCCACAACC AGGTGGTGAA CGAAGCGGTC CGGATGCAGG CAGGCCACAT CACCGTGGAA
CACGAGGCGT ACCAGGCGGC TCCCGCCGTC GATCTGTTCA TCGGCGGCGT GGATCGGCTG
AGGCGGCGGA TCGACGGGAT GGAGGCCGTG GAGGCGACGA AGCTCCTCAT CCGCGGCCAG
GGCGTCGCCA ATTCGAGCGC CGGCGCAGTC GGGGTTGCCG TGATGGGGGT GGAGCCCTCC
GTCGAGGCCG GGACATCGCC CTTGGCAAGA CACATGGTGA CGGGAAGCAC CCTCGAAGAC
GGCGATGACC GAAAGGCGAT ACTGGGCGAG CATCTTGCCG ACCAATTGAA ATTGACGCAG
GGTAGCAAGC TGGTCCTGAC CACCAACAAT GCCCGGGGGG AACTGGTGGA GGAGCTGTGC
CGCGTGAAGG GCATCTTCCG TATCGGCTCG GACGAAATCG ACGGGTATCT CGTTCAGATC
CCTTTGGAGT TCGCTCAACG GGTCTTCGGC CTGCAACCCG ATGAAGCCAC TCAGTTGGGG
GTTGTTTTGA AGCGCCCGTC CGAACTGGAA GCAACGATCG GAGCCATCAA GGCCATCGAG
CGCGAAGAGT ACGCGGCCGT ACTGCCCTGG CAGGCGGTTC TTCCCGAGGT GGCGTCGTAT
ATCCGGTTAC GCCGGACTTC CACCTGGGTA TTCCAGAGCC TGCTGTTCAT CATCATCCTC
TTCACCATCC TCAACACCCT GCTCATGTCC GTCGTCGAAC GGGAGCGCGA GTTCGCCGTG
CTCCTGGCAC TGGGCACGCG CATCGGTCAG CTCAGGCGAC AGCTGTTCGT GGAATCGGCA
TTTATCGGGA TACTGGGCTG CGTCGCGGGA ATGTCGCTGG GAGGCGCCGC CGCCCTCTCG
CTCCAGGTTC ATGGGCTGGA CCTTTCGGGT TTCATGCCCG GAGGGGTTGA TTTACCCGCA
TTTCCTCATG ACTCCTGGAA CCGCTTGAGT ACAGCCATTT TACAGACCAT GCTTTTCCGT
TGA
 
Protein sequence
MIVRLAWRSI WRNRRRTLIT IASLALGLTI AIFFIALSEG VHNQVVNEAV RMQAGHITVE 
HEAYQAAPAV DLFIGGVDRL RRRIDGMEAV EATKLLIRGQ GVANSSAGAV GVAVMGVEPS
VEAGTSPLAR HMVTGSTLED GDDRKAILGE HLADQLKLTQ GSKLVLTTNN ARGELVEELC
RVKGIFRIGS DEIDGYLVQI PLEFAQRVFG LQPDEATQLG VVLKRPSELE ATIGAIKAIE
REEYAAVLPW QAVLPEVASY IRLRRTSTWV FQSLLFIIIL FTILNTLLMS VVEREREFAV
LLALGTRIGQ LRRQLFVESA FIGILGCVAG MSLGGAAALS LQVHGLDLSG FMPGGVDLPA
FPHDSWNRLS TAILQTMLFR