| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_5041 |
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| Symbol | |
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| ID | 3520008 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | - |
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| Start bp | 5359273 |
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| End bp | 5360598 |
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| Gene Length | 1326 bp |
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| Protein Length | 441 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 637287480 |
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| Product | putative ABC transporter, permease protein |
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| Protein accession | YP_271679 |
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| Protein GI | 71279549 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG4591] ABC-type transport system, involved in lipoprotein release, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAACAC GAACACCTAA TTCATACAAT GCTTCTAAAC TCGATAACAA CGGCTCATCA
GCTACTGTCA ATGAATCCAA CTCGACTCAA CATAACAGCA GTCAAAATGC GATAATTGCA
CGTTTAGCCA AGCGCAGTAT TTTTAGAAAT ACTCGTAGAA CACTATTAAC CGTACTTCTT
ATTTCATGCA GCCTAGCGGC TATTTTATTT ACCGATGCTT TTGTCAGAGG CATGGTAGAA
ACCATGGTAA AAATCAGTAC ACAAACCTTC TTAGGAGAAG GACAAATTCA TCGGGTGGGT
TTTCGTGAGG CAAACGATAT AGATTTATAC ATTGAAGATA CTACAACACT ATATCAGCAA
CTTAACGCCA CCACAGCCAT TCAAGCATTT GCCCCAAGGG TATTAACAGG CGCGATGACC
TCCTCTTCTG AAAATGTTGC CTCAGCAATT GTTTATGGTG TAGATGCAAT ACAAGAAGCA
CAAGTGAGTA AGTTAAAATT AGCGGTAACT CAAGGGGAAT ATTTATCAGG TATTGATGGT
GAAATCATCA TAGGAGAACA ACTTGCTGAT TTATTAGAAA TTAGTTTAGG TGACCGGGTG
GTTATTACTG TTTCAGAAGC TAATGGTGGC GATTTATCTC AAGCACTGTT TCGTGTTTCA
GGCTTATTTA GTTTTAATGA AAGAAGCATG GATATAGGTA TGGCTTTTAT TAACTTGTCA
CAAGGACAGA AATTGTTAAA CATTGCTGGT GTGCATGAAG TTGCTCTTCG TTTACAACAC
TTACATCAAG CTGAAGATAG TACCCTACCC TTTTGGAAAA CACTTAATAA TGACCAAATA
GAAACGTTAA GTTGGAAAGA ATTAGTGCCT CAATTAAGTA GTATGCTGGC GATGACCAAG
TACTCGACAC TGATTGTTTC AATCATCATG TATGTACTGG TTTGCTTAGG GTTAATAAAC
ACTATGTTTA TGTCTATTTT TGAGCGACAA ACAGAGTTTG GTATTTTACT GGCTATAGGA
ACACGATCTA AGCAGCTCTT TTATCAAATA ATGCTGGAAG GTTTTTTCAT CGGTTTGTTA
AGCGTAACTG TTGGTTTATT AATGGCTTTT CTCTTGTGCT ACTGGGGTTC TATTGTCGGT
ATAGATTACT CTGAATTAGA AATGTCAGGT ATGACTTTAA ATGAACCCAT CTATTTAATA
CTCGACGCCA GCAGTTTTGC CATTATGGGA GTCGCGACGT TAGCAGTTAC CCTTATTGCG
AGTGTATACC CTGCTTTTCA TGCGGCGCGT TTACAACCTT CTTTTGCCAT GCGAAAAACC
CTCTAA
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| Protein sequence | MATRTPNSYN ASKLDNNGSS ATVNESNSTQ HNSSQNAIIA RLAKRSIFRN TRRTLLTVLL
ISCSLAAILF TDAFVRGMVE TMVKISTQTF LGEGQIHRVG FREANDIDLY IEDTTTLYQQ
LNATTAIQAF APRVLTGAMT SSSENVASAI VYGVDAIQEA QVSKLKLAVT QGEYLSGIDG
EIIIGEQLAD LLEISLGDRV VITVSEANGG DLSQALFRVS GLFSFNERSM DIGMAFINLS
QGQKLLNIAG VHEVALRLQH LHQAEDSTLP FWKTLNNDQI ETLSWKELVP QLSSMLAMTK
YSTLIVSIIM YVLVCLGLIN TMFMSIFERQ TEFGILLAIG TRSKQLFYQI MLEGFFIGLL
SVTVGLLMAF LLCYWGSIVG IDYSELEMSG MTLNEPIYLI LDASSFAIMG VATLAVTLIA
SVYPAFHAAR LQPSFAMRKT L
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