Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nmul_A2509 |
Symbol | |
ID | 3786634 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrosospira multiformis ATCC 25196 |
Kingdom | Bacteria |
Replicon accession | NC_007614 |
Strand | - |
Start bp | 2867723 |
End bp | 2868967 |
Gene Length | 1245 bp |
Protein Length | 414 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 637812600 |
Product | LolC/E family lipoprotein releasing system, transmembrane protein |
Protein accession | YP_413190 |
Protein GI | 82703624 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG4591] ABC-type transport system, involved in lipoprotein release, permease component |
TIGRFAM ID | [TIGR02212] lipoprotein releasing system, transmembrane protein, LolC/E family |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.418191 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGTCCTCGT ACGAACTCTT CATCGGTTTG CGTTACACCC GCGCCAAGCG CCGCAATCAC TTCATCTCGT TCATTTCCCT CATTTCCTTG CTCGGTATTA CGCTTGGGAT GACAGCGCTC ATTACCGTTA TGTCGGTTAT GAACGGATTT CAGAAGGAAG TCCGCTCGCG CATCCTCGGT GTCGCGTCCC ATATCCAGGT GAGCGGCGTG GAGGGTACGC TGACGGATTG GCGAAAAGTT GCCGAAGAAG CGCGCAGGCA TCCCGAGGTG GAGGCCGCTG CACCCTACAT CAGCGCACAG GGGATGGTGT CGTTCGATCA GGCCGTGAGC GGTGTGGCCG TGCGAGGCAT CCTGCCTGGC ATGGAGGATC ACGTGGCAGA TCTCGGACGG ATGATGATAG ACGGCAGACT GGAAAATCTG GCGCCGGGAG AGTTCGGTAT AGTCATCGGC CGCGAGCTGG CACGCTCGCT GGGGGTTTTT ACGGGTGACA GGATCGTATT GATCTCGCCA CAGGGACAGG TGACGCCTGC AGGGATCATT CCGCGCCTCA AGCAGTTCAC GATTATCGGG ATATTCGAAG CGGGCCATTT CGAATACGAC TCCGGGCTCG TGCTCATCCA TCTGGCAGAT GCACAAAAGC TGTATCGCAT GGAAAACCAG GTATCAGGCG TGCGCCTCAA GTTGCATGAT CTTTTCAAGG CGCCGCAAGT CGCGCGTGAG CTCGTGCCGC TGATTTCCAG CGATGTCTAT ATCAGCGACT GGACTCGCCA ACACGCCAAT TATTTTCGGG CCATACAGAT CGAGAAACGC ATGCTGTCTC TCATTCTTGC ACTGATCATC GCAGTGGCGG CGTTCAATAT TGTCTCCACA TTGGTGATGG CCGTGACGGA CAAGCAATCG GATATTGCGA TATTGCGCAC CCTGGGTGCG AGTCCGCGCA GCATCATGAA AATCTTTATC GTGCAGGGAA CCTGGATCGG GGTGGTCGGT ACCGCATTGG GGGTCATCGG CGGCGTGTTG CTTGCCTACA ATGTGGAGGC GGTCATTGCG ATGATAGAGC GGTTGTTCAG CGTGCAGTTC CTGTCCAGCG AAGTCTACGT CATCAGCGAA ATTCCCTCCG ACCTCCAGTT CGATGACGTG ATTGCCGTCG CCATCGTTTC CTTCGTGTTG ACACTGCTGG CAACACTCTA CCCGAGCTAT CGCGCTTCAA AGATCAATCC GGCCGAGGCG CTGCGGTATG AGTGA
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Protein sequence | MSSYELFIGL RYTRAKRRNH FISFISLISL LGITLGMTAL ITVMSVMNGF QKEVRSRILG VASHIQVSGV EGTLTDWRKV AEEARRHPEV EAAAPYISAQ GMVSFDQAVS GVAVRGILPG MEDHVADLGR MMIDGRLENL APGEFGIVIG RELARSLGVF TGDRIVLISP QGQVTPAGII PRLKQFTIIG IFEAGHFEYD SGLVLIHLAD AQKLYRMENQ VSGVRLKLHD LFKAPQVARE LVPLISSDVY ISDWTRQHAN YFRAIQIEKR MLSLILALII AVAAFNIVST LVMAVTDKQS DIAILRTLGA SPRSIMKIFI VQGTWIGVVG TALGVIGGVL LAYNVEAVIA MIERLFSVQF LSSEVYVISE IPSDLQFDDV IAVAIVSFVL TLLATLYPSY RASKINPAEA LRYE
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