| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tcr_0435 |
|---|
| Symbol | |
|---|
| ID | 3761254 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thiomicrospira crunogena XCL-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007520 |
|---|
| Strand | - |
|---|
| Start bp | 488119 |
|---|
| End bp | 489414 |
|---|
| Gene Length | 1296 bp |
|---|
| Protein Length | 431 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 637785146 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_390705 |
|---|
| Protein GI | 78484780 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG4591] ABC-type transport system, involved in lipoprotein release, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.131989 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACAATC CGATTTTCAA TCGCCTGACC TTATTGCAAT TTATAGCCTG GCGAAATATT
TGGCGAAACC GGGTCAGAAG CAGTCTGACG ATTTCCGCAC TGGCCGGTGG GTTGATTATG
CTCATCCTGT ATGCGGCTTT GTTAGAGGGC ATGTCTCGCC AAATGGTGAC CTATGCGACT
GATATTTCCA GCTCACATCT TCAAATGCAC CGCTCAGCCT ACATTGATGA TCAGGACATT
TATGCCACCA TCCCATGGTC GTATTTAACC GCTCTTGAAA ACTCTTCTCT TCCTGTTGAA
ATGGCTCCTA GACTTTATGC GGCAGCGTTA GCGAGTTCAA AAGATAATTC AACCGGTGTC
ATGATCAAAG CGATTGACCC ACAACGAGAA CGCCATGTCA CTAAATTGCT TACCCACATG
CGCTCCGGCA AAGCATCGTT TACGCCCATA CAAAAAAACG GATTAACACA TTACCCCGTT
TTGATCGGAG CTCAGCTTGC AAGAAATTTA CAACTCTCTC CCGGAAGTGA ATTGGTTCTG
GTCACACAAG CGATTGACGG AAGTATAGGA AACGCTCTTT TTGAAGTCAC GGGAATCTTA
AGGCCGCTTG AACCCAACTT TGATCGCATG GGCGTTTTAA TGTCGATTAA AGCGTATCAA
AGCCTTATGT ATCAAGAGGA TGGCTTTCAT GAATTGGCAA TTAAAACGCA CAATATTGAT
CACTTAAACA CCCTGCAAAA ACAACTCGAG ATGCAAATCG CTCAATTACA ACAACGCAAC
CCTTTAGACG CATTGGGTGG TAACGTGGTT ATTCGAAACT GGAAAGAACT CAATCCCCCA
GTTGCGGACA TGTTGGAACT GAGCAGTACC ATGTTACTGA TTGTCGGCTT AATCGTAATT
GGCCTCGCAT CACTGGGGAT GGTGAATACC ATGTTAATGT CGGTGCATGA ACGAACGCAT
GAATTTGGCA CCTTACTGGC CATTGGTATG AAAGCACGCT GGCTCTTATT GATGGTCGTT
ATGGAATCTT TTTATTTAGC CTTAATATCC GCAATTATCG GTTCGATAAT TGGGAGCGCC
ATTGCCAAAC AATTTGAAAA TAAAGGCATC GACTTCAGTC ATATGATGCC AGATGGTTAT
GACTGGGCTG GCGTTGTTTT TGAACCGGTC ATGAAAGGCT ATCTGTTACC CGAGCAAGTC
TTTCAAGCCA GTCTATTAAT GATTGTATTA ACCATGCTGG CCGCCTTAAT CCCATCATGG
CGTATTGTGC GTTTAAAGCC TGCTGAGGTA ATTTAA
|
|---|
| Protein sequence | MNNPIFNRLT LLQFIAWRNI WRNRVRSSLT ISALAGGLIM LILYAALLEG MSRQMVTYAT
DISSSHLQMH RSAYIDDQDI YATIPWSYLT ALENSSLPVE MAPRLYAAAL ASSKDNSTGV
MIKAIDPQRE RHVTKLLTHM RSGKASFTPI QKNGLTHYPV LIGAQLARNL QLSPGSELVL
VTQAIDGSIG NALFEVTGIL RPLEPNFDRM GVLMSIKAYQ SLMYQEDGFH ELAIKTHNID
HLNTLQKQLE MQIAQLQQRN PLDALGGNVV IRNWKELNPP VADMLELSST MLLIVGLIVI
GLASLGMVNT MLMSVHERTH EFGTLLAIGM KARWLLLMVV MESFYLALIS AIIGSIIGSA
IAKQFENKGI DFSHMMPDGY DWAGVVFEPV MKGYLLPEQV FQASLLMIVL TMLAALIPSW
RIVRLKPAEV I
|
|---|
| |