| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_3421 |
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| Symbol | |
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| ID | 4674588 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax sp. JS42 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008782 |
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| Strand | - |
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| Start bp | 3613305 |
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| End bp | 3614558 |
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| Gene Length | 1254 bp |
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| Protein Length | 417 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 639840456 |
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| Product | LolC/E family lipoprotein releasing system, transmembrane protein |
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| Protein accession | YP_987614 |
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| Protein GI | 121595718 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG4591] ABC-type transport system, involved in lipoprotein release, permease component |
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| TIGRFAM ID | [TIGR02212] lipoprotein releasing system, transmembrane protein, LolC/E family |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.176273 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAATTC CCTACGAACT GGCCCTGGGC TGGCGCTACA CCCGGGCAGG CCGGGCCACG
CGGCGCAACG GCTTCATCTC CTTCATCTCG GGCGTGTCCA TGCTGGGCAT CTCTCTGGGG
GTGGCGGCAC TCATCATCGT TCTGTCCGTG ATGAACGGCT TTCAGAAAGA GGTGCGCGAC
CGCATGCTCA GCGTGGTCTC GCACATCGAG ATCTTCGCGC CGGGCGGTGC AGCGCTGCCC
GACATGCCGC GCACGCTGGC CGAGGCGCGG GCCAATCCGA ACGTGGTGGG CGCCGCGCCC
TTCGTCGCCG CCCAGGCGCT GCTGGCGCGT GGCGAGGACA TGAAGGGCGC GCTGGTGCGC
GGCATCGACC CCGCGCACGA GGCCGAGGTG ACCGACCTGG CCGCCGAGAA TCTGGAGGGC
CTGAAGGCCC TGGTGCCGGG CGAGTTCCGC GTGATCCTGG GCAGCGAACT GGCGCGCCAG
CTGGGCGTGC GCGCGGGTGA TGCGGTCACG TTGATTGCCC CGGCCGGCCA GGTCACGCCT
GCGGGCGTGG TGCCGCGCCT CAAGCAGATG ACGGTGGCGG GCACCTTCAA TTCGGGCCAC
TATGAATACG ACTCTGCGCT GGTGATGCTG CACCACGAGG ATGCCGAGCG CATCTTCCGC
CTGGAAGGGC CGACTGGCGT GCGCCTGAAG CTCAAGAACC TGCATGACGC ACCCGAAGTC
ACGCAGCAAC TGGCGCACAG CCTCTCGGGC AACCTGTTGA TCCGCGACTG GACGCAGCAG
AACCGCACCT GGTTCGCGGC CGTGCAGCTG GAAAAGCGCA TGATGTTCAT CATCCTCACG
CTGATCGTCG CGGTGGCGGC GTTCAACCTG GTGTCCACGC TGGTGATGAC CGTGACCGAC
AAGCGCGCGG ACATCGCCAT CCTGCGCACG CTGGGCGCCA GCCCCGCCAG CATCATGGGC
GTGTTCATGG TGCAGGGCGC CATGGTGGGC GTGATCGGCA CGCTGGCCGG CCTGCTGCTG
GGCCTGGGCG TGGCCTTCAA CATCGACGTG ATCGTGCCCG CCATCGAGCG GGCGCTGAAC
GCCAGCTTCC TGCCCAAGGA CATCTACCTC ATCAGCAAGA TGCCCAGCGA CCCGCAAAGC
AGCGACATCG CGCCCATTGC CGTCATTTCC CTGATCCTGG CCTTCGTGGC CACCCTGTAC
CCGAGCTGGC GCGCCAGCCG CGTGAACCCC GCGGAGGCGC TGCGCTATGA GTAA
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| Protein sequence | MQIPYELALG WRYTRAGRAT RRNGFISFIS GVSMLGISLG VAALIIVLSV MNGFQKEVRD
RMLSVVSHIE IFAPGGAALP DMPRTLAEAR ANPNVVGAAP FVAAQALLAR GEDMKGALVR
GIDPAHEAEV TDLAAENLEG LKALVPGEFR VILGSELARQ LGVRAGDAVT LIAPAGQVTP
AGVVPRLKQM TVAGTFNSGH YEYDSALVML HHEDAERIFR LEGPTGVRLK LKNLHDAPEV
TQQLAHSLSG NLLIRDWTQQ NRTWFAAVQL EKRMMFIILT LIVAVAAFNL VSTLVMTVTD
KRADIAILRT LGASPASIMG VFMVQGAMVG VIGTLAGLLL GLGVAFNIDV IVPAIERALN
ASFLPKDIYL ISKMPSDPQS SDIAPIAVIS LILAFVATLY PSWRASRVNP AEALRYE
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