Gene Sfum_2497 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_2497 
Symbol 
ID4459212 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp3079538 
End bp3080806 
Gene Length1269 bp 
Protein Length422 aa 
Translation table11 
GC content64% 
IMG OID639703262 
Producthypothetical protein 
Protein accessionYP_846611 
Protein GI116749924 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG4591] ABC-type transport system, involved in lipoprotein release, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.536779 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGTCTTC TGCGCGTTTC ATGGCGGAAC CTCTGGAGAA ACCGCAGACG CACCGCCATC 
ACCATGTCGG CGATCGCCCT GAACACCCTG ATCCTCATCA CTACGTACTC CCTCATGGGC
GGTTTCCTGA AGCAAACGGT CCGCAACGTC ACGCAGTTGG CCACGGGTGA GGCTCAGCTG
CATGCCCCCG GATACCTTTC CGATCGTTCC CTCTACAAAC GGATCGCCCA CCCCCGGATC
CTCCTCCAGG CGCTTGGCGA ACATTCCATC GGCGCCGCCC CACGAACCTA CGGTTACGGG
CTGGTCAGCA GGGGGACTAA ATCCGCCGGC GCTCTCTTCC AGGGAGTGGA ACCGGCAATG
GAGGCGGCTG CCTTCGAGCT TGCCGGGCAC CTCGCGCAGG GAACTTTTCT GGCCCCGGCC
GCTCGCAAGG GGTTGGTGCT GGGCCGGAAG CTGGCCAAGT CCCTCAACGC CGAGGTCGGC
TCCGAAATCG TGGTCCTCGT GCAGGCGGCC GACGGGTCCC TGGGGAATGA CCTCTTCACC
GTCGTGGGAA TTCTCGGAGC GGTCGGCGAA GCCATCGACC GAAACGCGGC CATGATGCAC
CTGGACGATT TCAGGCAGCT CTTTGCGATG CCGGAAGGCA TTCACGAAAT CGCCGTCAAC
ACGAGGGGGC GGCTTCCCTT GGATGCCCTG GTCGAGACGC TGTCCCGCCT GGCGCCCGGG
GACGAGGTTA GAACCTGGCG CCGGCTGCTG CCGACCTTTT CGGACATGAT CGAGCTCTCC
GGCGTCAGCA TGTCCATCTT CGGGGCCATC TTCCTCATCG CAGCCGGACT GGGGGTCATG
AACACCATGC TCATGGCGAC CTATGAGCGG GCGCGCGAAT TCGCATTGCA GAAAGCCCTC
GGTGCCACGC CCTGGCGAAT CGTGCGCGAC GTGACCTTCG AGGCGTGGCT GCTGGCATGT
GTCGCCACCC TGTTCGGGAC TCTGGCGGGG CTTGCCGCCT CCACCATTCT CCAAACGACG
GGCCTGAACA CGGCAAGCCT TGCGGGGGAG ACCACGATCT CCGGGGTGGT GTTCGACCCC
GTGTGGCGCG CCGACCTCAC CCTCCGGACG GTCGTGTGGC CGGTATTCAT GATGTGGGCG
GTGTGCGTCC TGGCGGCACT GTATCCCGCC GCCATGTCCG CCCGTGACAT GGGGTCAAAC
CTACACTTTT CACATTTTCT ACGAGCCGGA CCGCGCAGCG TCTGCGGCAC GGGAAGGCGG
CGGTCATGA
 
Protein sequence
MSLLRVSWRN LWRNRRRTAI TMSAIALNTL ILITTYSLMG GFLKQTVRNV TQLATGEAQL 
HAPGYLSDRS LYKRIAHPRI LLQALGEHSI GAAPRTYGYG LVSRGTKSAG ALFQGVEPAM
EAAAFELAGH LAQGTFLAPA ARKGLVLGRK LAKSLNAEVG SEIVVLVQAA DGSLGNDLFT
VVGILGAVGE AIDRNAAMMH LDDFRQLFAM PEGIHEIAVN TRGRLPLDAL VETLSRLAPG
DEVRTWRRLL PTFSDMIELS GVSMSIFGAI FLIAAGLGVM NTMLMATYER AREFALQKAL
GATPWRIVRD VTFEAWLLAC VATLFGTLAG LAASTILQTT GLNTASLAGE TTISGVVFDP
VWRADLTLRT VVWPVFMMWA VCVLAALYPA AMSARDMGSN LHFSHFLRAG PRSVCGTGRR
RS