Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfum_2497 |
Symbol | |
ID | 4459212 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophobacter fumaroxidans MPOB |
Kingdom | Bacteria |
Replicon accession | NC_008554 |
Strand | + |
Start bp | 3079538 |
End bp | 3080806 |
Gene Length | 1269 bp |
Protein Length | 422 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 639703262 |
Product | hypothetical protein |
Protein accession | YP_846611 |
Protein GI | 116749924 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG4591] ABC-type transport system, involved in lipoprotein release, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.536779 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGTCTTC TGCGCGTTTC ATGGCGGAAC CTCTGGAGAA ACCGCAGACG CACCGCCATC ACCATGTCGG CGATCGCCCT GAACACCCTG ATCCTCATCA CTACGTACTC CCTCATGGGC GGTTTCCTGA AGCAAACGGT CCGCAACGTC ACGCAGTTGG CCACGGGTGA GGCTCAGCTG CATGCCCCCG GATACCTTTC CGATCGTTCC CTCTACAAAC GGATCGCCCA CCCCCGGATC CTCCTCCAGG CGCTTGGCGA ACATTCCATC GGCGCCGCCC CACGAACCTA CGGTTACGGG CTGGTCAGCA GGGGGACTAA ATCCGCCGGC GCTCTCTTCC AGGGAGTGGA ACCGGCAATG GAGGCGGCTG CCTTCGAGCT TGCCGGGCAC CTCGCGCAGG GAACTTTTCT GGCCCCGGCC GCTCGCAAGG GGTTGGTGCT GGGCCGGAAG CTGGCCAAGT CCCTCAACGC CGAGGTCGGC TCCGAAATCG TGGTCCTCGT GCAGGCGGCC GACGGGTCCC TGGGGAATGA CCTCTTCACC GTCGTGGGAA TTCTCGGAGC GGTCGGCGAA GCCATCGACC GAAACGCGGC CATGATGCAC CTGGACGATT TCAGGCAGCT CTTTGCGATG CCGGAAGGCA TTCACGAAAT CGCCGTCAAC ACGAGGGGGC GGCTTCCCTT GGATGCCCTG GTCGAGACGC TGTCCCGCCT GGCGCCCGGG GACGAGGTTA GAACCTGGCG CCGGCTGCTG CCGACCTTTT CGGACATGAT CGAGCTCTCC GGCGTCAGCA TGTCCATCTT CGGGGCCATC TTCCTCATCG CAGCCGGACT GGGGGTCATG AACACCATGC TCATGGCGAC CTATGAGCGG GCGCGCGAAT TCGCATTGCA GAAAGCCCTC GGTGCCACGC CCTGGCGAAT CGTGCGCGAC GTGACCTTCG AGGCGTGGCT GCTGGCATGT GTCGCCACCC TGTTCGGGAC TCTGGCGGGG CTTGCCGCCT CCACCATTCT CCAAACGACG GGCCTGAACA CGGCAAGCCT TGCGGGGGAG ACCACGATCT CCGGGGTGGT GTTCGACCCC GTGTGGCGCG CCGACCTCAC CCTCCGGACG GTCGTGTGGC CGGTATTCAT GATGTGGGCG GTGTGCGTCC TGGCGGCACT GTATCCCGCC GCCATGTCCG CCCGTGACAT GGGGTCAAAC CTACACTTTT CACATTTTCT ACGAGCCGGA CCGCGCAGCG TCTGCGGCAC GGGAAGGCGG CGGTCATGA
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Protein sequence | MSLLRVSWRN LWRNRRRTAI TMSAIALNTL ILITTYSLMG GFLKQTVRNV TQLATGEAQL HAPGYLSDRS LYKRIAHPRI LLQALGEHSI GAAPRTYGYG LVSRGTKSAG ALFQGVEPAM EAAAFELAGH LAQGTFLAPA ARKGLVLGRK LAKSLNAEVG SEIVVLVQAA DGSLGNDLFT VVGILGAVGE AIDRNAAMMH LDDFRQLFAM PEGIHEIAVN TRGRLPLDAL VETLSRLAPG DEVRTWRRLL PTFSDMIELS GVSMSIFGAI FLIAAGLGVM NTMLMATYER AREFALQKAL GATPWRIVRD VTFEAWLLAC VATLFGTLAG LAASTILQTT GLNTASLAGE TTISGVVFDP VWRADLTLRT VVWPVFMMWA VCVLAALYPA AMSARDMGSN LHFSHFLRAG PRSVCGTGRR RS
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