More than 300 homologs were found in PanDaTox collection
for query gene Rpic_1691 on replicon NC_010682
Organism: Ralstonia pickettii 12J



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010682  Rpic_1691  protein of unknown function DUF214  100 
 
 
295 aa  570  1.0000000000000001e-162  Ralstonia pickettii 12J  Bacteria  normal  0.132145  normal 
 
 
-
 
NC_012849  Rpic12D_5303  protein of unknown function DUF214  100 
 
 
830 aa  567  1e-161  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_010682  Rpic_1663  protein of unknown function DUF214  37.54 
 
 
535 aa  169  6e-41  Ralstonia pickettii 12J  Bacteria  normal  normal 
 
 
-
 
NC_007498  Pcar_2373  ABC-type transport system, permease component  33 
 
 
407 aa  155  5.0000000000000005e-37  Pelobacter carbinolicus DSM 2380  Bacteria  hitchhiker  0.000351897  n/a   
 
 
-
 
NC_003910  CPS_5041  putative ABC transporter, permease protein  30.38 
 
 
441 aa  137  2e-31  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_013501  Rmar_2534  protein of unknown function DUF214  34.88 
 
 
406 aa  136  4e-31  Rhodothermus marinus DSM 4252  Bacteria  normal  0.261611  n/a   
 
 
-
 
NC_013501  Rmar_2535  protein of unknown function DUF214  34.98 
 
 
412 aa  134  9.999999999999999e-31  Rhodothermus marinus DSM 4252  Bacteria  normal  n/a   
 
 
-
 
NC_008554  Sfum_2498  hypothetical protein  31.64 
 
 
380 aa  130  4.0000000000000003e-29  Syntrophobacter fumaroxidans MPOB  Bacteria  decreased coverage  0.00553555  normal 
 
 
-
 
NC_008554  Sfum_2497  hypothetical protein  33.8 
 
 
422 aa  128  1.0000000000000001e-28  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.536779  normal 
 
 
-
 
NC_007520  Tcr_0434  hypothetical protein  28.95 
 
 
425 aa  127  3e-28  Thiomicrospira crunogena XCL-2  Bacteria  normal  n/a   
 
 
-
 
NC_009784  VIBHAR_05402  hypothetical protein  28.33 
 
 
411 aa  120  3e-26  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_007498  Pcar_2374  ABC-type transport system, permease component  31.13 
 
 
409 aa  119  7.999999999999999e-26  Pelobacter carbinolicus DSM 2380  Bacteria  hitchhiker  0.000200206  n/a   
 
 
-
 
NC_009831  Ssed_3196  hypothetical protein  29.97 
 
 
410 aa  116  3.9999999999999997e-25  Shewanella sediminis HAW-EB3  Bacteria  normal  normal 
 
 
-
 
NC_013457  VEA_001465  ABC-type transport system involved in lipoprotein release permease component  26.28 
 
 
411 aa  111  2.0000000000000002e-23  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_010814  Glov_0758  lipoprotein releasing system, transmembrane protein, LolC/E family  28.9 
 
 
420 aa  109  6e-23  Geobacter lovleyi SZ  Bacteria  decreased coverage  0.00020569  n/a   
 
 
-
 
NC_009092  Shew_2659  hypothetical protein  28.72 
 
 
421 aa  109  6e-23  Shewanella loihica PV-4  Bacteria  normal  normal 
 
 
-
 
NC_003910  CPS_5042  ABC transporter, permease protein, putative  25.16 
 
 
415 aa  106  4e-22  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_008609  Ppro_3015  LolC/E family lipoprotein releasing system, transmembrane protein  27.8 
 
 
420 aa  106  6e-22  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_009092  Shew_2660  hypothetical protein  27.97 
 
 
410 aa  104  2e-21  Shewanella loihica PV-4  Bacteria  normal  normal 
 
 
-
 
NC_009483  Gura_3239  LolC/E family lipoprotein releasing system, transmembrane protein  27.5 
 
 
424 aa  103  3e-21  Geobacter uraniireducens Rf4  Bacteria  normal  0.0892821  n/a   
 
 
-
 
NC_010506  Swoo_1430  hypothetical protein  28.19 
 
 
428 aa  102  8e-21  Shewanella woodyi ATCC 51908  Bacteria  normal  normal 
 
 
-
 
NC_011146  Gbem_0837  lipoprotein releasing system, transmembrane protein, LolC/E family  26.37 
 
 
416 aa  101  1e-20  Geobacter bemidjiensis Bem  Bacteria  normal  0.0822431  n/a   
 
 
-
 
NC_007520  Tcr_0435  hypothetical protein  28.53 
 
 
431 aa  101  1e-20  Thiomicrospira crunogena XCL-2  Bacteria  normal  0.131989  n/a   
 
 
-
 
NC_007298  Daro_2394  hypothetical protein  29.08 
 
 
406 aa  100  2e-20  Dechloromonas aromatica RCB  Bacteria  normal  0.48898  normal  0.587335 
 
 
-
 
NC_011899  Hore_23270  ABC-type transport system, involved in lipoprotein release, permease component  29.57 
 
 
411 aa  99.8  6e-20  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_3423  lipoprotein releasing system, transmembrane protein, LolC/E family  26.2 
 
 
416 aa  99  9e-20  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_013889  TK90_1199  lipoprotein releasing system, transmembrane protein, LolC/E family  29.51 
 
 
416 aa  98.2  1e-19  Thioalkalivibrio sp. K90mix  Bacteria  normal  normal  0.132324 
 
 
-
 
NC_013173  Dbac_3383  lipoprotein releasing system, transmembrane protein, LolC/E family  26.82 
 
 
409 aa  98.6  1e-19  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_013223  Dret_2233  lipoprotein releasing system, transmembrane protein, LolC/E family  27.27 
 
 
409 aa  98.6  1e-19  Desulfohalobium retbaense DSM 5692  Bacteria  normal  normal 
 
 
-
 
NC_008554  Sfum_3743  LolC/E family lipoprotein releasing system, transmembrane protein  25.8 
 
 
410 aa  98.6  1e-19  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.14534  normal 
 
 
-
 
NC_011899  Hore_23240  ABC-type transport system, involved in lipoprotein release, permease component  30.1 
 
 
415 aa  97.1  3e-19  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_009831  Ssed_3197  hypothetical protein  25.69 
 
 
427 aa  97.1  3e-19  Shewanella sediminis HAW-EB3  Bacteria  normal  normal 
 
 
-
 
NC_011662  Tmz1t_1622  protein of unknown function DUF214  31.48 
 
 
413 aa  96.3  6e-19  Thauera sp. MZ1T  Bacteria  normal  n/a   
 
 
-
 
NC_008062  Bcen_5639  hypothetical protein  34.1 
 
 
387 aa  95.9  8e-19  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_008544  Bcen2424_6004  hypothetical protein  34.1 
 
 
405 aa  95.5  8e-19  Burkholderia cenocepacia HI2424  Bacteria  normal  normal 
 
 
-
 
NC_010581  Bind_1796  LolC/E family lipoprotein releasing system, transmembrane protein  27.11 
 
 
439 aa  95.1  1e-18  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  0.401704  normal 
 
 
-
 
NC_008751  Dvul_0889  LolC/E family lipoprotein releasing system, transmembrane protein  28.99 
 
 
411 aa  95.1  1e-18  Desulfovibrio vulgaris DP4  Bacteria  normal  normal 
 
 
-
 
NC_009511  Swit_2346  LolC/E family lipoprotein releasing system, transmembrane protein  29.83 
 
 
416 aa  95.1  1e-18  Sphingomonas wittichii RW1  Bacteria  normal  0.323587  normal 
 
 
-
 
NC_009484  Acry_0940  LolC/E family lipoprotein releasing system, transmembrane protein  24.92 
 
 
415 aa  94.7  1e-18  Acidiphilium cryptum JF-5  Bacteria  normal  n/a   
 
 
-
 
NC_007519  Dde_1366  LolC/E family lipoprotein releasing system, transmembrane protein  24.76 
 
 
408 aa  95.5  1e-18  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  0.217764  n/a   
 
 
-
 
NC_010506  Swoo_1429  hypothetical protein  24.83 
 
 
411 aa  94.7  2e-18  Shewanella woodyi ATCC 51908  Bacteria  normal  normal 
 
 
-
 
NC_002939  GSU2270  ABC transporter, permease protein  25.23 
 
 
423 aa  94  3e-18  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_010814  Glov_1801  protein of unknown function DUF214  26.3 
 
 
412 aa  93.2  4e-18  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_013946  Mrub_2903  hypothetical protein  30.54 
 
 
410 aa  93.6  4e-18  Meiothermus ruber DSM 1279  Bacteria  normal  normal  0.110934 
 
 
-
 
NC_007509  Bcep18194_C7413  ABC efflux pump, inner membrane subunit  35.19 
 
 
405 aa  93.2  5e-18  Burkholderia sp. 383  Bacteria  normal  0.155043  normal 
 
 
-
 
NC_007511  Bcep18194_B0507  LolC/E family lipoprotein releasing system, transmembrane protein  26.28 
 
 
427 aa  92.8  6e-18  Burkholderia sp. 383  Bacteria  normal  normal 
 
 
-
 
NC_013457  VEA_000978  ABC-type transport system involved in lipoprotein release permease component  32.82 
 
 
422 aa  92.8  7e-18  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_013457  VEA_001464  ABC-type transport system involved in lipoprotein release permease component  28.57 
 
 
409 aa  91.7  1e-17  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_010515  Bcenmc03_5146  LolC/E family lipoprotein releasing system, transmembrane protein  25.4 
 
 
417 aa  92  1e-17  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal 
 
 
-
 
NC_013440  Hoch_1920  protein of unknown function DUF214  24.92 
 
 
470 aa  91.3  2e-17  Haliangium ochraceum DSM 14365  Bacteria  normal  0.911684  normal 
 
 
-
 
NC_009784  VIBHAR_07028  efflux ABC transporter ATP-binding/permease  32.82 
 
 
422 aa  91.3  2e-17  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_011666  Msil_0700  lipoprotein releasing system, transmembrane protein, LolC/E family  28.67 
 
 
423 aa  89.7  5e-17  Methylocella silvestris BL2  Bacteria  n/a    normal 
 
 
-
 
NC_008061  Bcen_3231  LolC/E family lipoprotein releasing system, transmembrane protein  25.08 
 
 
422 aa  89  9e-17  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.113164  n/a   
 
 
-
 
NC_008543  Bcen2424_5136  LolC/E family lipoprotein releasing system, transmembrane protein  25.08 
 
 
422 aa  89  9e-17  Burkholderia cenocepacia HI2424  Bacteria  normal  0.433144  normal 
 
 
-
 
NC_010644  Emin_1310  hypothetical protein  25.31 
 
 
409 aa  88.6  1e-16  Elusimicrobium minutum Pei191  Bacteria  normal  normal 
 
 
-
 
NC_008553  Mthe_0918  hypothetical protein  27.09 
 
 
389 aa  88.2  1e-16  Methanosaeta thermophila PT  Archaea  normal  n/a   
 
 
-
 
NC_010512  Bcenmc03_6495  hypothetical protein  34.1 
 
 
405 aa  87.8  2e-16  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal  0.96926 
 
 
-
 
NC_007355  Mbar_A3445  hypothetical protein  25.33 
 
 
389 aa  87.4  3e-16  Methanosarcina barkeri str. Fusaro  Archaea  hitchhiker  0.000000235465  normal  0.187048 
 
 
-
 
NC_011899  Hore_23260  ABC-type transport system, involved in lipoprotein release, permease component  27.06 
 
 
419 aa  86.7  4e-16  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_007298  Daro_2395  hypothetical protein  27.12 
 
 
404 aa  87  4e-16  Dechloromonas aromatica RCB  Bacteria  normal  0.111806  normal  0.574816 
 
 
-
 
NC_009784  VIBHAR_05401  hypothetical protein  25.81 
 
 
409 aa  87  4e-16  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_007520  Tcr_1172  LolC/E family lipoprotein releasing system, transmembrane protein  22.59 
 
 
416 aa  86.3  5e-16  Thiomicrospira crunogena XCL-2  Bacteria  normal  0.0830739  n/a   
 
 
-
 
NC_011769  DvMF_2994  lipoprotein releasing system, transmembrane protein, LolC/E family  26.52 
 
 
417 aa  86.7  5e-16  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_007947  Mfla_2095  LolC/E family lipoprotein releasing system, transmembrane protein  25.9 
 
 
421 aa  86.7  5e-16  Methylobacillus flagellatus KT  Bacteria  decreased coverage  0.00459774  normal 
 
 
-
 
NC_007925  RPC_2428  LolC/E family lipoprotein releasing system, transmembrane protein  24.42 
 
 
426 aa  85.9  7e-16  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.507047  normal  0.0670699 
 
 
-
 
NC_009457  VC0395_A1472  outer membrane-specific lipoprotein transporter subunit LolE  25.25 
 
 
414 aa  85.9  7e-16  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_007355  Mbar_A3444  putative ABC transporter permease protein  27.61 
 
 
389 aa  85.9  8e-16  Methanosarcina barkeri str. Fusaro  Archaea  normal  0.0182994  normal  0.122472 
 
 
-
 
NC_007406  Nwi_1864  LolC/E family lipoprotein releasing system, transmembrane protein  24.43 
 
 
426 aa  85.5  9e-16  Nitrobacter winogradskyi Nb-255  Bacteria  normal  0.172929  normal  0.0361846 
 
 
-
 
NC_009943  Dole_2846  LolC/E family lipoprotein releasing system, transmembrane protein  26.47 
 
 
408 aa  84.7  0.000000000000001  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_013422  Hneap_0224  lipoprotein releasing system, transmembrane protein, LolC/E family  26.38 
 
 
415 aa  85.1  0.000000000000001  Halothiobacillus neapolitanus c2  Bacteria  normal  0.0374875  n/a   
 
 
-
 
NC_009485  BBta_4040  putative lipoprotein-releasing system transmembrane protein (lolC)  28.23 
 
 
411 aa  84.7  0.000000000000002  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.0498435 
 
 
-
 
NC_009092  Shew_1634  LolC/E family lipoprotein releasing system, transmembrane protein  27.19 
 
 
417 aa  84.3  0.000000000000002  Shewanella loihica PV-4  Bacteria  normal  0.0870078  normal  0.876319 
 
 
-
 
NC_007964  Nham_2196  LolC/E family lipoprotein releasing system, transmembrane protein  23.43 
 
 
426 aa  84  0.000000000000003  Nitrobacter hamburgensis X14  Bacteria  decreased coverage  0.00714902  n/a   
 
 
-
 
NC_009675  Anae109_1118  hypothetical protein  25.31 
 
 
661 aa  83.2  0.000000000000005  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  normal  0.0279794 
 
 
-
 
NC_010725  Mpop_1000  lipoprotein releasing system, transmembrane protein, LolC/E family  25.65 
 
 
439 aa  82.8  0.000000000000007  Methylobacterium populi BJ001  Bacteria  normal  normal  0.14096 
 
 
-
 
NC_013440  Hoch_3974  protein of unknown function DUF214  26.45 
 
 
952 aa  82.4  0.000000000000009  Haliangium ochraceum DSM 14365  Bacteria  normal  0.146468  normal 
 
 
-
 
NC_011004  Rpal_3275  lipoprotein releasing system, transmembrane protein, LolC/E family  25.18 
 
 
422 aa  82  0.00000000000001  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.314483  n/a   
 
 
-
 
NC_009620  Smed_3748  hypothetical protein  25.42 
 
 
416 aa  82  0.00000000000001  Sinorhizobium medicae WSM419  Bacteria  normal  0.244082  normal 
 
 
-
 
NC_007404  Tbd_1761  LolC/E family lipoprotein releasing system, transmembrane protein  26.71 
 
 
414 aa  82  0.00000000000001  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.293206  normal 
 
 
-
 
NC_010571  Oter_3938  hypothetical protein  26.16 
 
 
414 aa  82  0.00000000000001  Opitutus terrae PB90-1  Bacteria  normal  0.158906  normal 
 
 
-
 
NC_011883  Ddes_0613  lipoprotein releasing system, transmembrane protein, LolC/E family  24.84 
 
 
411 aa  82  0.00000000000001  Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774  Bacteria  unclonable  0.00000287642  n/a   
 
 
-
 
NC_008347  Mmar10_1376  LolC/E family lipoprotein releasing system, transmembrane protein  24.28 
 
 
443 aa  81.6  0.00000000000001  Maricaulis maris MCS10  Bacteria  normal  0.0730301  normal  0.0697431 
 
 
-
 
NC_010513  Xfasm12_0384  lipoprotein releasing system transmembrane protein  24.92 
 
 
413 aa  81.3  0.00000000000002  Xylella fastidiosa M12  Bacteria  normal  n/a   
 
 
-
 
NC_007614  Nmul_A2509  LolC/E family lipoprotein releasing system, transmembrane protein  23.86 
 
 
414 aa  81.3  0.00000000000002  Nitrosospira multiformis ATCC 25196  Bacteria  normal  0.418191  n/a   
 
 
-
 
NC_008392  Bamb_6148  hypothetical protein  32.45 
 
 
405 aa  81.3  0.00000000000002  Burkholderia ambifaria AMMD  Bacteria  normal  normal  0.315368 
 
 
-
 
NC_009485  BBta_4530  LolC/E family lipoprotein releasing system, transmembrane protein  24 
 
 
426 aa  80.9  0.00000000000002  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.947625  normal 
 
 
-
 
NC_010505  Mrad2831_2040  LolC/E family lipoprotein releasing system, transmembrane protein  26.37 
 
 
436 aa  80.9  0.00000000000002  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.489126  normal 
 
 
-
 
NC_007517  Gmet_2359  LolC/E family lipoprotein releasing system, transmembrane protein  24.92 
 
 
423 aa  80.5  0.00000000000003  Geobacter metallireducens GS-15  Bacteria  normal  normal 
 
 
-
 
NC_007973  Rmet_1040  LolC/E family lipoprotein releasing system, transmembrane protein  24.2 
 
 
416 aa  80.5  0.00000000000003  Cupriavidus metallidurans CH34  Bacteria  normal  normal  0.678846 
 
 
-
 
NC_007347  Reut_A1076  LolC/E family lipoprotein releasing system, transmembrane protein  23.73 
 
 
416 aa  80.1  0.00000000000004  Ralstonia eutropha JMP134  Bacteria  normal  0.0609031  n/a   
 
 
-
 
NC_007958  RPD_2864  LolC/E family lipoprotein releasing system, transmembrane protein  22.94 
 
 
422 aa  80.1  0.00000000000004  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.998701  normal  0.300269 
 
 
-
 
NC_013456  VEA_003990  lipoprotein releasing system transmembrane protein LolE  25.5 
 
 
414 aa  79.7  0.00000000000005  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_010577  XfasM23_0348  LolC/E family lipoprotein releasing system, transmembrane protein  24.59 
 
 
413 aa  79.7  0.00000000000005  Xylella fastidiosa M23  Bacteria  normal  n/a   
 
 
-
 
NC_010172  Mext_1065  LolC/E family lipoprotein releasing system, transmembrane protein  25.28 
 
 
439 aa  79.7  0.00000000000005  Methylobacterium extorquens PA1  Bacteria  normal  normal  0.123078 
 
 
-
 
NC_008639  Cpha266_1098  hypothetical protein  23.55 
 
 
429 aa  79.7  0.00000000000005  Chlorobium phaeobacteroides DSM 266  Bacteria  normal  0.0142755  n/a   
 
 
-
 
NC_011662  Tmz1t_1621  protein of unknown function DUF214  30.45 
 
 
404 aa  79.7  0.00000000000005  Thauera sp. MZ1T  Bacteria  normal  n/a   
 
 
-
 
NC_011761  AFE_0481  lipoprotein releasing system transmembrane protein LolC  23.08 
 
 
414 aa  79.3  0.00000000000006  Acidithiobacillus ferrooxidans ATCC 23270  Bacteria  normal  n/a   
 
 
-
 
NC_011757  Mchl_1195  lipoprotein releasing system, transmembrane protein, LolC/E family  25.28 
 
 
439 aa  79.7  0.00000000000006  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal 
 
 
-
 
NC_011206  Lferr_0641  lipoprotein releasing system, transmembrane protein, LolC/E family  23.08 
 
 
414 aa  79.3  0.00000000000006  Acidithiobacillus ferrooxidans ATCC 53993  Bacteria  normal  0.256103  normal 
 
 
-
 
NC_007794  Saro_1765  LolC/E family lipoprotein releasing system, transmembrane protein  27.59 
 
 
413 aa  79.3  0.00000000000007  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  0.157209  n/a   
 
 
-
 
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