More than 300 homologs were found in PanDaTox collection
for query gene Pmen_1621 on replicon NC_009439
Organism: Pseudomonas mendocina ymp



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_009439  Pmen_1621  HAD family hydrolase  100 
 
 		 231 aa  469  1.0000000000000001e-131  Pseudomonas mendocina ymp  Bacteria  normal  0.0638141  normal  1 
 
 
-
 
NC_004578  PSPTO_3839  HAD-superfamily hydrolase  65.28 
 
 		 220 aa  286  2e-76  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.0865807  n/a   
 
 
-
 
NC_007005  Psyr_1640  HAD family hydrolase  64.35 
 
 		 220 aa  284  8e-76  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  1  normal  0.284861 
 
 
-
 
NC_009656  PSPA7_2187  putative hydrolase  63.04 
 
 		 230 aa  281  5.000000000000001e-75  Pseudomonas aeruginosa PA7  Bacteria  normal  0.0143931  n/a   
 
 
-
 
NC_008463  PA14_25590  putative hydrolase  61.74 
 
 		 230 aa  276  2e-73  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.080664  normal  1 
 
 
-
 
NC_010501  PputW619_1518  HAD family hydrolase  64.02 
 
 		 226 aa  271  6e-72  Pseudomonas putida W619  Bacteria  hitchhiker  0.0020263  normal  1 
 
 
-
 
NC_010322  PputGB1_1483  HAD family hydrolase  64.02 
 
 		 224 aa  268  5.9999999999999995e-71  Pseudomonas putida GB-1  Bacteria  normal  0.0762089  normal  1 
 
 
-
 
NC_012560  Avin_14840  HAD-superfamily hydrolase  65.12 
 
 		 220 aa  267  8.999999999999999e-71  Azotobacter vinelandii DJ  Bacteria  normal  0.770171  n/a   
 
 
-
 
NC_002947  PP_1907  HAD superfamily hydrolase  62.15 
 
 		 224 aa  264  8e-70  Pseudomonas putida KT2440  Bacteria  normal  1  unclonable  0.00000027861 
 
 
-
 
NC_009512  Pput_3807  HAD family hydrolase  62.15 
 
 		 224 aa  262  3e-69  Pseudomonas putida F1  Bacteria  normal  0.118188  normal  1 
 
 
-
 
NC_007492  Pfl01_4164  HAD family hydrolase  63.16 
 
 		 193 aa  239  2.9999999999999997e-62  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.0540485  normal  0.889807 
 
 
-
 
NC_007484  Noc_0178  HAD family hydrolase  48.37 
 
 		 230 aa  200  9.999999999999999e-51  Nitrosococcus oceani ATCC 19707  Bacteria  hitchhiker  0.000756614  n/a   
 
 
-
 
NC_010506  Swoo_2034  HAD family hydrolase  46.98 
 
 		 216 aa  196  2.0000000000000003e-49  Shewanella woodyi ATCC 51908  Bacteria  normal  0.645104  normal  0.0672621 
 
 
-
 
NC_009831  Ssed_2632  HAD family hydrolase  44.65 
 
 		 216 aa  194  9e-49  Shewanella sediminis HAW-EB3  Bacteria  normal  0.861911  hitchhiker  0.000131082 
 
 
-
 
NC_009092  Shew_1595  HAD family hydrolase  45.27 
 
 		 219 aa  184  8e-46  Shewanella loihica PV-4  Bacteria  hitchhiker  0.00389314  normal  0.0112895 
 
 
-
 
NC_007912  Sde_1621  TatD-related deoxyribonuclease  43.06 
 
 		 214 aa  184  1.0000000000000001e-45  Saccharophagus degradans 2-40  Bacteria  normal  0.0243824  normal  1 
 
 
-
 
NC_008709  Ping_2206  HAD family hydrolase  43.2 
 
 		 227 aa  180  1e-44  Psychromonas ingrahamii 37  Bacteria  normal  0.0834963  normal  0.088242 
 
 
-
 
NC_008700  Sama_1987  HAD family hydrolase  47.76 
 
 		 215 aa  180  2e-44  Shewanella amazonensis SB2B  Bacteria  normal  0.0143235  normal  0.0109237 
 
 
-
 
NC_009654  Mmwyl1_2240  HAD family hydrolase  44.08 
 
 		 214 aa  176  4e-43  Marinomonas sp. MWYL1  Bacteria  normal  0.279618  normal  0.937061 
 
 
-
 
NC_009665  Shew185_1709  HAD family hydrolase  40.6 
 
 		 238 aa  175  5e-43  Shewanella baltica OS185  Bacteria  hitchhiker  0.00000000621435  n/a   
 
 
-
 
NC_010524  Lcho_0590  HAD family hydrolase  45.62 
 
 		 219 aa  174  9.999999999999999e-43  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  0.0419315 
 
 
-
 
NC_009052  Sbal_1712  HAD family hydrolase  39.66 
 
 		 239 aa  173  1.9999999999999998e-42  Shewanella baltica OS155  Bacteria  hitchhiker  0.00000000827821  n/a   
 
 
-
 
NC_011901  Tgr7_1355  HAD-superfamily hydrolase, subfamily IA, variant 1  46.3 
 
 		 228 aa  173  1.9999999999999998e-42  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.873579  n/a   
 
 
-
 
NC_009997  Sbal195_1752  HAD family hydrolase  40.25 
 
 		 238 aa  173  1.9999999999999998e-42  Shewanella baltica OS195  Bacteria  hitchhiker  0.00000718269  normal  0.2896 
 
 
-
 
NC_011663  Sbal223_2655  HAD-superfamily hydrolase, subfamily IA, variant 3  40.51 
 
 		 239 aa  173  1.9999999999999998e-42  Shewanella baltica OS223  Bacteria  normal  0.019501  hitchhiker  0.000128755 
 
 
-
 
NC_008345  Sfri_1492  HAD family hydrolase  44.08 
 
 		 217 aa  172  3.9999999999999995e-42  Shewanella frigidimarina NCIMB 400  Bacteria  normal  0.210059  n/a   
 
 
-
 
NC_008577  Shewana3_2565  HAD family hydrolase  41.7 
 
 		 244 aa  172  5e-42  Shewanella sp. ANA-3  Bacteria  hitchhiker  0.00000244874  normal  1 
 
 
-
 
NC_009438  Sputcn32_1575  HAD family hydrolase  40.25 
 
 		 238 aa  171  5.999999999999999e-42  Shewanella putrefaciens CN-32  Bacteria  hitchhiker  0.000310395  n/a   
 
 
-
 
NC_008322  Shewmr7_2473  HAD family hydrolase  40.34 
 
 		 248 aa  171  6.999999999999999e-42  Shewanella sp. MR-7  Bacteria  hitchhiker  0.000591891  hitchhiker  0.00615598 
 
 
-
 
NC_007404  Tbd_1562  putative hydrolase  43.5 
 
 		 218 aa  170  2e-41  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.320439  normal  0.240105 
 
 
-
 
NC_007954  Sden_2300  HAD family hydrolase  42.25 
 
 		 215 aa  169  3e-41  Shewanella denitrificans OS217  Bacteria  hitchhiker  0.00000000835779  n/a   
 
 
-
 
NC_009901  Spea_2502  HAD family hydrolase  46.6 
 
 		 200 aa  169  4e-41  Shewanella pealeana ATCC 700345  Bacteria  normal  0.396303  n/a   
 
 
-
 
NC_011662  Tmz1t_2434  HAD-superfamily hydrolase, subfamily IA, variant 1  46.23 
 
 		 218 aa  168  6e-41  Thauera sp. MZ1T  Bacteria  normal  0.282448  n/a   
 
 
-
 
NC_003910  CPS_2291  HAD family hydrolase  41.51 
 
 		 218 aa  167  1e-40  Colwellia psychrerythraea 34H  Bacteria  normal  0.265516  n/a   
 
 
-
 
NC_008740  Maqu_1874  HAD family hydrolase  42.18 
 
 		 216 aa  165  4e-40  Marinobacter aquaeolei VT8  Bacteria  normal  0.785736  n/a   
 
 
-
 
NC_008321  Shewmr4_2403  HAD family hydrolase  39.06 
 
 		 248 aa  165  6.9999999999999995e-40  Shewanella sp. MR-4  Bacteria  hitchhiker  0.000000854479  normal  1 
 
 
-
 
NC_007969  Pcryo_0284  HAD family hydrolase  43.78 
 
 		 234 aa  163  2.0000000000000002e-39  Psychrobacter cryohalolentis K5  Bacteria  normal  1  normal  0.251372 
 
 
-
 
NC_010681  Bphyt_2920  HAD-superfamily hydrolase, subfamily IA, variant 1  43.66 
 
 		 219 aa  163  2.0000000000000002e-39  Burkholderia phytofirmans PsJN  Bacteria  hitchhiker  0.00300829  normal  1 
 
 
-
 
NC_007963  Csal_1594  HAD family hydrolase  46.41 
 
 		 234 aa  162  5.0000000000000005e-39  Chromohalobacter salexigens DSM 3043  Bacteria  normal  0.109016  n/a   
 
 
-
 
NC_010622  Bphy_0820  HAD family hydrolase  43.19 
 
 		 219 aa  160  1e-38  Burkholderia phymatum STM815  Bacteria  normal  0.362734  normal  1 
 
 
-
 
NC_007947  Mfla_1323  HAD family hydrolase  42.45 
 
 		 218 aa  160  1e-38  Methylobacillus flagellatus KT  Bacteria  hitchhiker  0.00010916  normal  0.934661 
 
 
-
 
NC_009524  PsycPRwf_0481  HAD family hydrolase  41.86 
 
 		 231 aa  158  6e-38  Psychrobacter sp. PRwf-1  Bacteria  normal  0.158536  normal  1 
 
 
-
 
NC_011138  MADE_02338  putative phosphoglycolate phosphatase, contains a phosphatase-like domain  40.93 
 
 		 234 aa  158  6e-38  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  0.0463297  n/a   
 
 
-
 
NC_007951  Bxe_A1064  putative haloacid dehalogenase-like hydrolase  42.25 
 
 		 219 aa  157  1e-37  Burkholderia xenovorans LB400  Bacteria  normal  0.259823  normal  1 
 
 
-
 
NC_007204  Psyc_0258  phosphoglycolate phosphatase  45.65 
 
 		 235 aa  157  2e-37  Psychrobacter arcticus 273-4  Bacteria  normal  0.691366  normal  1 
 
 
-
 
NC_007347  Reut_A2273  HAD family hydrolase  42.72 
 
 		 219 aa  157  2e-37  Ralstonia eutropha JMP134  Bacteria  normal  0.768763  n/a   
 
 
-
 
NC_007973  Rmet_2438  HAD family hydrolase  43.4 
 
 		 219 aa  156  3e-37  Cupriavidus metallidurans CH34  Bacteria  normal  0.625372  normal  1 
 
 
-
 
NC_008390  Bamb_0989  HAD family hydrolase  45.07 
 
 		 222 aa  153  2.9999999999999998e-36  Burkholderia ambifaria AMMD  Bacteria  normal  1  n/a   
 
 
-
 
NC_010551  BamMC406_0993  HAD family hydrolase  44.6 
 
 		 222 aa  151  8.999999999999999e-36  Burkholderia ambifaria MC40-6  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010508  Bcenmc03_1071  HAD family hydrolase  45.07 
 
 		 219 aa  150  1e-35  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.357132  normal  0.149129 
 
 
-
 
NC_013422  Hneap_1758  HAD-superfamily hydrolase, subfamily IA, variant 1  39.37 
 
 		 234 aa  150  2e-35  Halothiobacillus neapolitanus c2  Bacteria  normal  0.0639278  n/a   
 
 
-
 
NC_008825  Mpe_A0658  haloacid dehalogenase-like hydrolase  41.78 
 
 		 222 aa  149  3e-35  Methylibium petroleiphilum PM1  Bacteria  normal  1  normal  0.40238 
 
 
-
 
NC_010002  Daci_5280  HAD family hydrolase  41.94 
 
 		 228 aa  149  3e-35  Delftia acidovorans SPH-1  Bacteria  normal  0.94241  normal  1 
 
 
-
 
NC_003295  RSc1042  putative phosphoglycolate phosphatase protein  45.62 
 
 		 219 aa  148  6e-35  Ralstonia solanacearum GMI1000  Bacteria  normal  0.0803838  normal  1 
 
 
-
 
NC_010084  Bmul_2191  HAD family hydrolase  44.7 
 
 		 219 aa  148  6e-35  Burkholderia multivorans ATCC 17616  Bacteria  normal  1  normal  0.0671825 
 
 
-
 
NC_008060  Bcen_0633  HAD family hydrolase  44.6 
 
 		 219 aa  148  6e-35  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.32289  n/a   
 
 
-
 
NC_008542  Bcen2424_1113  HAD family hydrolase  44.6 
 
 		 219 aa  148  6e-35  Burkholderia cenocepacia HI2424  Bacteria  normal  0.970841  n/a   
 
 
-
 
NC_007510  Bcep18194_A4225  phosphatase-like  44.6 
 
 		 219 aa  147  1.0000000000000001e-34  Burkholderia sp. 383  Bacteria  normal  0.559723  normal  1 
 
 
-
 
NC_011992  Dtpsy_2641  HAD-superfamily hydrolase, subfamily IA, variant 1  42.92 
 
 		 222 aa  145  7.0000000000000006e-34  Acidovorax ebreus TPSY  Bacteria  normal  1  n/a   
 
 
-
 
NC_008782  Ajs_3288  HAD family hydrolase  42.92 
 
 		 222 aa  145  7.0000000000000006e-34  Acidovorax sp. JS42  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007520  Tcr_0705  HAD family hydrolase  40.5 
 
 		 214 aa  144  8.000000000000001e-34  Thiomicrospira crunogena XCL-2  Bacteria  normal  0.399525  n/a   
 
 
-
 
NC_007651  BTH_I1709  haloacid dehalogenase-like hydrolase  43.19 
 
 		 222 aa  144  1e-33  Burkholderia thailandensis E264  Bacteria  normal  0.0748768  n/a   
 
 
-
 
NC_009076  BURPS1106A_2861  HAD superfamily hydrolase  43.66 
 
 		 219 aa  142  3e-33  Burkholderia pseudomallei 1106a  Bacteria  normal  0.0565933  n/a   
 
 
-
 
NC_009379  Pnuc_0391  HAD family hydrolase  40.09 
 
 		 229 aa  143  3e-33  Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1  Bacteria  normal  1  n/a   
 
 
-
 
NC_009074  BURPS668_2800  HAD superfamily hydrolase  43.66 
 
 		 219 aa  142  3e-33  Burkholderia pseudomallei 668  Bacteria  hitchhiker  0.00584417  n/a   
 
 
-
 
NC_007434  BURPS1710b_2916  haloacid dehalogenase-like hydrolase  43.66 
 
 		 237 aa  143  3e-33  Burkholderia pseudomallei 1710b  Bacteria  normal  0.0271792  n/a   
 
 
-
 
NC_010682  Rpic_0907  HAD-superfamily hydrolase, subfamily IA, variant 1  43.32 
 
 		 219 aa  141  9e-33  Ralstonia pickettii 12J  Bacteria  normal  0.0464753  normal  0.0304334 
 
 
-
 
NC_012856  Rpic12D_0972  HAD-superfamily hydrolase, subfamily IA, variant 1  43.32 
 
 		 219 aa  140  9.999999999999999e-33  Ralstonia pickettii 12D  Bacteria  normal  1  normal  0.0569787 
 
 
-
 
NC_010531  Pnec_0398  HAD-superfamily hydrolase, subfamily IA, variant 1  38.6 
 
 		 226 aa  139  3.9999999999999997e-32  Polynucleobacter necessarius subsp. necessarius STIR1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007908  Rfer_1722  HAD family hydrolase  41.67 
 
 		 228 aa  138  6e-32  Rhodoferax ferrireducens T118  Bacteria  normal  1  n/a   
 
 
-
 
NC_013889  TK90_1192  HAD-superfamily hydrolase, subfamily IA, variant 1  40.87 
 
 		 232 aa  137  1e-31  Thioalkalivibrio sp. K90mix  Bacteria  normal  0.998223  normal  0.137923 
 
 
-
 
NC_008576  Mmc1_1778  HAD family hydrolase  38.18 
 
 		 222 aa  137  2e-31  Magnetococcus sp. MC-1  Bacteria  normal  0.0979226  decreased coverage  0.0000822361 
 
 
-
 
NC_007948  Bpro_3658  HAD family hydrolase  39.63 
 
 		 219 aa  134  9.999999999999999e-31  Polaromonas sp. JS666  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008752  Aave_1175  HAD family hydrolase  42.99 
 
 		 222 aa  134  1.9999999999999998e-30  Acidovorax citrulli AAC00-1  Bacteria  normal  0.341694  normal  1 
 
 
-
 
NC_008781  Pnap_3084  HAD family hydrolase  38.71 
 
 		 219 aa  131  9e-30  Polaromonas naphthalenivorans CJ2  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008786  Veis_4786  HAD family hydrolase  38.68 
 
 		 225 aa  130  2.0000000000000002e-29  Verminephrobacter eiseniae EF01-2  Bacteria  normal  1  normal  0.480444 
 
 
-
 
NC_012791  Vapar_1380  HAD-superfamily hydrolase, subfamily IA, variant 1  41.59 
 
 		 223 aa  127  1.0000000000000001e-28  Variovorax paradoxus S110  Bacteria  normal  1  n/a   
 
 
-
 
NC_010172  Mext_0280  HAD family hydrolase  38.1 
 
 		 233 aa  125  4.0000000000000003e-28  Methylobacterium extorquens PA1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008347  Mmar10_1760  HAD family hydrolase  37.21 
 
 		 260 aa  125  5e-28  Maricaulis maris MCS10  Bacteria  normal  0.960773  normal  0.487326 
 
 
-
 
NC_011757  Mchl_0323  HAD-superfamily hydrolase, subfamily IA, variant 1  38.1 
 
 		 233 aa  125  8.000000000000001e-28  Methylobacterium chloromethanicum CM4  Bacteria  normal  1  normal  0.0341719 
 
 
-
 
NC_009511  Swit_2711  HAD family hydrolase  40.43 
 
 		 230 aa  124  9e-28  Sphingomonas wittichii RW1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007643  Rru_A2658  haloacid dehalogenase-like hydrolase  37.16 
 
 		 236 aa  124  1e-27  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  1  n/a   
 
 
-
 
NC_010725  Mpop_0356  HAD-superfamily hydrolase, subfamily IA, variant 1  37.57 
 
 		 233 aa  123  3e-27  Methylobacterium populi BJ001  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008686  Pden_0791  HAD family hydrolase  39.35 
 
 		 220 aa  122  4e-27  Paracoccus denitrificans PD1222  Bacteria  normal  0.226537  normal  1 
 
 
-
 
NC_007802  Jann_0625  HAD family hydrolase  37.38 
 
 		 221 aa  120  1.9999999999999998e-26  Jannaschia sp. CCS1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011761  AFE_2218  HAD-superfamily hydrolase, subfamily IA  39.72 
 
 		 227 aa  119  3e-26  Acidithiobacillus ferrooxidans ATCC 23270  Bacteria  normal  1  n/a   
 
 
-
 
NC_011206  Lferr_1872  HAD-superfamily hydrolase, subfamily IA, variant 3  39.72 
 
 		 227 aa  119  3e-26  Acidithiobacillus ferrooxidans ATCC 53993  Bacteria  normal  0.117122  normal  1 
 
 
-
 
NC_011666  Msil_2100  HAD-superfamily hydrolase, subfamily IA, variant 1  36.49 
 
 		 215 aa  119  6e-26  Methylocella silvestris BL2  Bacteria  n/a    normal  1 
 
 
-
 
NC_011989  Avi_2262  hydrolase  33.94 
 
 		 223 aa  118  9.999999999999999e-26  Agrobacterium vitis S4  Bacteria  normal  1  n/a   
 
 
-
 
NC_010505  Mrad2831_0854  HAD family hydrolase  37.76 
 
 		 221 aa  116  3e-25  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.249022  decreased coverage  0.000200034 
 
 
-
 
NC_010581  Bind_1313  HAD family hydrolase  35.62 
 
 		 232 aa  114  1.0000000000000001e-24  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  1  normal  0.95229 
 
 
-
 
NC_009719  Plav_2768  HAD family hydrolase  35.06 
 
 		 237 aa  112  5e-24  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.654297  normal  0.45248 
 
 
-
 
NC_007794  Saro_2839  HAD family hydrolase  35.68 
 
 		 218 aa  111  8.000000000000001e-24  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  0.0722376  n/a   
 
 
-
 
NC_007802  Jann_0734  HAD family hydrolase  37.14 
 
 		 241 aa  110  2.0000000000000002e-23  Jannaschia sp. CCS1  Bacteria  normal  0.879574  normal  1 
 
 
-
 
NC_009952  Dshi_0316  phosphoglycolate phosphatase  37.79 
 
 		 226 aa  109  4.0000000000000004e-23  Dinoroseobacter shibae DFL 12  Bacteria  normal  1  normal  0.547041 
 
 
-
 
NC_009720  Xaut_4762  HAD family hydrolase  33.96 
 
 		 242 aa  108  6e-23  Xanthobacter autotrophicus Py2  Bacteria  normal  0.698376  hitchhiker  0.00269567 
 
 
-
 
NC_008044  TM1040_0292  HAD family hydrolase  35.53 
 
 		 222 aa  108  1e-22  Ruegeria sp. TM1040  Bacteria  normal  0.402537  normal  0.982934 
 
 
-
 
NC_006369  lpl2213  hypothetical protein  31.6 
 
 		 219 aa  107  2e-22  Legionella pneumophila str. Lens  Bacteria  n/a    n/a   
 
 
-
 
NC_009972  Haur_0384  HAD family hydrolase  34.74 
 
 		 222 aa  107  2e-22  Herpetosiphon aurantiacus ATCC 23779  Bacteria  decreased coverage  0.0000045535  n/a   
 
 
-
 
NC_009832  Spro_1697  HAD family hydrolase  33.48 
 
 		 231 aa  106  3e-22  Serratia proteamaculans 568  Bacteria  normal  1  normal  0.0993915 
 
 
-
 
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