| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_0993 |
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| Symbol | |
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| ID | 6176306 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | + |
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| Start bp | 1086119 |
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| End bp | 1086787 |
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| Gene Length | 669 bp |
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| Protein Length | 222 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641680745 |
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| Product | HAD family hydrolase |
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| Protein accession | YP_001807700 |
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| Protein GI | 172060048 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0546] Predicted phosphatases |
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| TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTCGCA TGGCCCGACA GCAATTTGAC CTGATCGTCT TCGACTGGGA CGGCACGCTG
ATGGATTCGA CTGCGCACAT CGCGCATAGC ATCCAGGCCG CGTGCCGCGA TCTCGGCCTG
CCCACGCCGT CGGACGAGGC GTCCCGCTAC GTGATCGGCC TGGGCCTGCG CGATGCGCTG
CGCATTGCCG CTCCGACCCT CGATCCGTCC GACTATCCCC GGCTGGCCGA GCGTTACCGT
TATCACTACC TGCTGGACGA CCAGCGCATC GAGCTGTTCG CCGGCGTGCG CGAACTGCTC
GCGGAATTGC GCGATACGGG TTACCTGCTC GCGGTCGCGA CCGGCAAGGG CCGGGTCGGG
CTGAATCGCG TGCTCGACCA GTCGAAGCTG ACGAGCCTGT TCGATGCGAC GCGCTGCGCG
GACGAAACGT TCTCGAAGCC GCACCCGGCG ATGCTGCATG AATTGTCCCG AGAATTGGGG
CAGGATCTGG CGCGCACCGT GATGATCGGC GACACCACGC ACGACCTGCA GATGGCGGCG
AGCGCGGGGG CGGCCGGTGT CGGCGTGTCG TACGGCGCGC ATACGGCCGA GGCGCTGGCC
GCGCTGACGC CGCACTTCGT CGCGCCGGAC GTCATCGCGC TGGCGGCATG GCTGCGGGAG
CACGCATGA
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| Protein sequence | MTRMARQQFD LIVFDWDGTL MDSTAHIAHS IQAACRDLGL PTPSDEASRY VIGLGLRDAL
RIAAPTLDPS DYPRLAERYR YHYLLDDQRI ELFAGVRELL AELRDTGYLL AVATGKGRVG
LNRVLDQSKL TSLFDATRCA DETFSKPHPA MLHELSRELG QDLARTVMIG DTTHDLQMAA
SAGAAGVGVS YGAHTAEALA ALTPHFVAPD VIALAAWLRE HA
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