| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_1621 |
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| Symbol | |
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| ID | 5109279 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 1786396 |
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| End bp | 1787091 |
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| Gene Length | 696 bp |
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| Protein Length | 231 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640502849 |
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| Product | HAD family hydrolase |
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| Protein accession | YP_001187117 |
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| Protein GI | 146306652 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0546] Predicted phosphatases |
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| TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.0638141 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCCTGAAT ATCAACTGCT GATTTTCGAC TGGGACGGCA CGCTGGTGGA TTCCATCGGC
CGTATCGTCG AGGCCATGCA TCGCGCGGCC GATGTAGCGG GCGTGCCGCG CTGCACGGAT
GTCGCGGTGC GCGGCATCAT TGGGCTGGAG CTGGGAGTGG CGATTCGTAC GCTGTACCCG
GAACTCGATG AACCGCTGCG AATCGAAACC ATCCGGCGCG CCTACAGCGA ACAGTATCTG
GCGCTGGAAA CCGAGCCTTC GCCGCTGTTC GAGGGTGTGC GGGAGTCGCT CGAGGCGTTT
CGCGAGCAGG GCTATGGTCT GGCGGTTGCA ACCGGCAAGG GGCGCAGCGG GTTGCAGCGG
GTGCTGGCGG ACAAGGGCTG GCTGGATTAT TTCGATGTCA CCCGCTGCGC CGACGAGACG
GCGAGCAAGC CGGATCCGCG TATGCTGCAC GAGATTCTCG CGCATTGCGG TGTGCACCCT
GAGCGGGCAT TGATGGTGGG CGATTCGACC TTCGATCTGC TGATGGCGCG CAATGCCGGG
ATGGATTCGG TTGCCGTGGG GTTCGGCGCG CAGCCGCTGT CGGTGTTGCG TGAGTGTTCG
CCGCGTCTGG CGATCAACGA TTTCAATGAG CTGCGCGCCT GGCTGGATGG GCGGGGCGCG
CAGCGTTCTG TAGAGGTGAG TGAACATGTC GGATGA
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| Protein sequence | MPEYQLLIFD WDGTLVDSIG RIVEAMHRAA DVAGVPRCTD VAVRGIIGLE LGVAIRTLYP
ELDEPLRIET IRRAYSEQYL ALETEPSPLF EGVRESLEAF REQGYGLAVA TGKGRSGLQR
VLADKGWLDY FDVTRCADET ASKPDPRMLH EILAHCGVHP ERALMVGDST FDLLMARNAG
MDSVAVGFGA QPLSVLRECS PRLAINDFNE LRAWLDGRGA QRSVEVSEHV G
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