| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_5280 |
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| Symbol | |
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| ID | 5750892 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | - |
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| Start bp | 5846086 |
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| End bp | 5846772 |
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| Gene Length | 687 bp |
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| Protein Length | 228 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641300405 |
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| Product | HAD family hydrolase |
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| Protein accession | YP_001566294 |
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| Protein GI | 160900712 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0546] Predicted phosphatases |
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| TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 0.94241 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 44 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAAATC CTGGTTCTTC CGAGATGCAC CGTGCGCGCC GCTTCGATCT CATTGCCTTC
GACTGGGATG GGACGCTGTC GGATTCCACC GCGGTGATCG TCAAGTGCAT TCAGGCGGCC
GTGGCCGATG TGGGGGGCAC GCCTCCCAGC GATGAGGCGG CGTCCTATGT GATCGGCATG
GCGCTGATGC CCGCATTGGC GCGTGCAGCG CCCGATGTGC CGCCCGAAAA ATACCCCGAG
CTGGGCAACC GCTATCGCCA CCATTTCATC AAGCACCAGG ACGACATCAG CCTGTTCGCC
GGCGTGCTGC CCATGCTGGC GGCGCTGCGC GAGCGAGGGC ACCTGCTGGC CGTGGCCACG
GGCAAGAGCC GGCGTGGTCT GAACGATGCG CTGCAGGACC CGCAGCTGCG CGGCATGTTC
GACAGCTCGC GCACGGCGGA CGAGACCGCC GGCAAGCCGA ATCCGCTGAT GCTGCAGGAG
CTGATGGCCG AATTTGGTGC GGACCCTTCG CGGGTGCTGA TGATCGGCGA CACCACGCAC
GACCTGGAAC TGGCCCGCAA TGCAGGCTGT GCCAGCGTGG GCGTGGGCTA TGGCGCGCAT
CCCACCGACG GCTTTGGCGT GCTGAAGCCG TTGCATGTGG CGCAGAGTGT TGCGGATTTG
CATCAGTGGC TGTTGGCCCA TGGCTGA
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| Protein sequence | MTNPGSSEMH RARRFDLIAF DWDGTLSDST AVIVKCIQAA VADVGGTPPS DEAASYVIGM
ALMPALARAA PDVPPEKYPE LGNRYRHHFI KHQDDISLFA GVLPMLAALR ERGHLLAVAT
GKSRRGLNDA LQDPQLRGMF DSSRTADETA GKPNPLMLQE LMAEFGADPS RVLMIGDTTH
DLELARNAGC ASVGVGYGAH PTDGFGVLKP LHVAQSVADL HQWLLAHG
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