| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_0391 |
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| Symbol | |
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| ID | 5053531 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009379 |
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| Strand | + |
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| Start bp | 384254 |
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| End bp | 384943 |
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| Gene Length | 690 bp |
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| Protein Length | 229 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640470542 |
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| Product | HAD family hydrolase |
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| Protein accession | YP_001155175 |
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| Protein GI | 145588578 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0546] Predicted phosphatases |
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| TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGCAAA CTAATAAACC AGAACGTCGA TATGACTTGA TTGTGTGGGA CTGGGATGGA
ACCATTATGG ATTCCACGCC CACCATCGTG TATTGCATTC AGCAGGCGTG CCGGGATCTG
GGTTTTAAAG AGCCAGATGA CACGTTGGCT AGTTCAGTGA TTGGATTGGG TATTCATGAT
TCATTGCGAC GAGCAGTTCC TTGGATTGAG CCAATTCATT TTCAAAAATT GACGGATCGT
TTTCGCTATC ACTACTTGGC AAAAGATCAT GAGCTTGATT TATTCGTCGG TATCCGTGAA
TTGCTTGAGG AACTCCGCGC CGACAATTAT CTCTTGGGTG TAGCAACAGG TAAGTCGCGT
GTTGGCTTAG ATCGGTCTTT GAAGCATCAT CAAATTGGCC ATCTTTTTCA TGAAACACGC
ACTGCAGATG AGTCATTCTC TAAGCCCCAT CCTGGAATGC TCTTAGAGCT TTCAGATGTA
TTGCAAGTAC CCACAAGGCG CATACTCATG ATTGGCGATA CCACCCATGA TTTAGATATG
GCTGCTAATG CTGGGGTTGA TGCAGTCGCT GTGACCTATG GCGCTCATCC ACCCGATACG
CTAAAAACTT CGCAGTCATT GACCCATGTG GATGATGTGA CTCAATTATC AGCATGGCTT
AAATCAAATT TGACAGCCCC ACTGAAGTAA
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| Protein sequence | MTQTNKPERR YDLIVWDWDG TIMDSTPTIV YCIQQACRDL GFKEPDDTLA SSVIGLGIHD
SLRRAVPWIE PIHFQKLTDR FRYHYLAKDH ELDLFVGIRE LLEELRADNY LLGVATGKSR
VGLDRSLKHH QIGHLFHETR TADESFSKPH PGMLLELSDV LQVPTRRILM IGDTTHDLDM
AANAGVDAVA VTYGAHPPDT LKTSQSLTHV DDVTQLSAWL KSNLTAPLK
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