Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_2920 |
Symbol | |
ID | 6281683 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010681 |
Strand | - |
Start bp | 3298860 |
End bp | 3299519 |
Gene Length | 660 bp |
Protein Length | 219 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 642622488 |
Product | HAD-superfamily hydrolase, subfamily IA, variant 1 |
Protein accession | YP_001896538 |
Protein GI | 187924896 |
COG category | [R] General function prediction only |
COG ID | [COG0546] Predicted phosphatases |
TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED [TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.00300829 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTAGAG AGCAATTTGA TCTGATCGTC TTCGACTGGG ACGGGACGTT GATGGATTCG ACCGCGCACA TCACGCGCAG CATCCAGTCG GCGTGCCGCG ATCTTGGGTT GCCGGTGCCC GCCGACGAGG CGGCCAGCTA TGTCATCGGC CTTGGTCTGC GCGACGCGCT GCAGATTGCC GCGCCCACGC TCGATCCTTC GGACTATCCG CGGCTGGCCG AGCGCTACCG CTTCCATTAT CTGGTGAAGG ATCAGACCAC CGAGCTGTTC GTCGGTGTGC GCGAGATGTT GCAGGAATTG CGCGATCAGG GCTATTTGCT GGCCGTGGCG ACGGGCAAGA GCCGCGTCGG GCTGAATCGC GCGTTGGATC AGTCGCGCTT GACAAGCCTG TTCGACGGCA CGCGCTGTGC CGACGAAACG TTCTCGAAGC CGCACCCCGC GATGCTGCAC GAATTGACGC GCGAACTGGG GCAGGATAAC GCGCGTACGG TGATGGTCGG CGATACGACG CACGATCTGC AAATGGCGAT CAACGCGGGC GTCGCGGGAA TTGGCGTCAC ATATGGCGCG CATCCTGCGG AATCGTTGAG CGCGTTGTCG CCTAGGTTCG TTGCGTCGAG CGTCAGCGTG CTGTCCGGCT GGCTGCGGGA GAACGCATGA
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Protein sequence | MAREQFDLIV FDWDGTLMDS TAHITRSIQS ACRDLGLPVP ADEAASYVIG LGLRDALQIA APTLDPSDYP RLAERYRFHY LVKDQTTELF VGVREMLQEL RDQGYLLAVA TGKSRVGLNR ALDQSRLTSL FDGTRCADET FSKPHPAMLH ELTRELGQDN ARTVMVGDTT HDLQMAINAG VAGIGVTYGA HPAESLSALS PRFVASSVSV LSGWLRENA
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