| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_0907 |
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| Symbol | |
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| ID | 6286242 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010682 |
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| Strand | + |
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| Start bp | 963423 |
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| End bp | 964082 |
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| Gene Length | 660 bp |
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| Protein Length | 219 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642624471 |
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| Product | HAD-superfamily hydrolase, subfamily IA, variant 1 |
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| Protein accession | YP_001898489 |
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| Protein GI | 187928002 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0546] Predicted phosphatases |
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| TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0464753 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.0304334 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGCAGC AGCGCTTTGA TCTGATCGTC TTCGATTGGG ATGGCACGTT GATGGATTCG
ACGTCGGCCA TCACCCGGTC GATCCAGCTC GCATGCCGGG ATCTTGACCT GCCGGTGCCC
GACGATGCAC GGGCGAGCCA CGTGATTGGC CTGGGCCTGC GGGATGCGCT CGAATATGCC
GTCCCGACGC TTGATCCCGC CGACTACGGC AAGCTGGCGG ACCGGTATCG TTTCCATTAC
CTCAGCCGTG ATGCGCATCT CGTCCTGTTT CCGGGCGTGC GAGAAATGCT GGAAGCACTG
CGCCGCCAGA ACTATCTGCT GGCTGTGGCG ACGGGCAAGT CCCGCGTGGG CCTGCAACGT
GCGATGGAGG CGACAAATCT GACGGGCGTG TTCGACAACA CGCGTTGCGC CGATGAGACG
TTCTCTAAGC CGCACCCCGC CATGCTGCTC GAACTCACGC GCGATCTCGG CATGGAGGTC
GAGCGCACCG TGATGATCGG CGACACGACG CACGATCTGC AAATGGCCGC CAATGCAGGC
GCCGCCGGCG TGGCCGTCAC ATACGGGGCG CATCCTGCCG ATGTGCTGGA TTCGCTTACG
CCGCTGTATA GCGCCAAGTC GGTTCCCGAT CTGCACAATT GGCTGACGCA ACATGCCTGA
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| Protein sequence | MPQQRFDLIV FDWDGTLMDS TSAITRSIQL ACRDLDLPVP DDARASHVIG LGLRDALEYA
VPTLDPADYG KLADRYRFHY LSRDAHLVLF PGVREMLEAL RRQNYLLAVA TGKSRVGLQR
AMEATNLTGV FDNTRCADET FSKPHPAMLL ELTRDLGMEV ERTVMIGDTT HDLQMAANAG
AAGVAVTYGA HPADVLDSLT PLYSAKSVPD LHNWLTQHA
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