Gene CPS_2291 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPS_2291 
Symbol 
ID3519377 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameColwellia psychrerythraea 34H 
KingdomBacteria 
Replicon accessionNC_003910 
Strand
Start bp2391873 
End bp2392529 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content40% 
IMG OID637284748 
ProductHAD family hydrolase 
Protein accessionYP_269011 
Protein GI71279136 
COG category[R] General function prediction only 
COG ID[COG0546] Predicted phosphatases 
TIGRFAM ID[TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.265516 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTACAAAT TAGTTATCTT TGATTGGGAT GGCACTTTGA TGGATTCTAT TGCTCGTATT 
GTGTCATCAA TGCAAGCGGC AGCCGATCAC TGTCAGTTAA CCATACCTAC AGTCAAGGGT
GTAAAAGATA TCATTGGCCT AAGTTTACCT AAAGCTCTTG ATATCTTATT CCCGGGGGCT
TCTCAAAGCC AAACTACAGC ATTGCTTGAG CAATATAAAT TTCAATATGT TGAAGGTGAT
AATACTCCAG CACCTTTATT TGAAGATGCT CTATCGTTAT TAAAAGCACT TAAGGATAAT
AATAGATTGT TAGCTGTGGC AACAGGTAAA GGCCGTGATG GTTTACAACG AGTCTTTTCG
GCTACCCAAA CTGAACATTT CTTTCATGCG TCACGCTGTG CAGATGAGGC ACTTTCTAAA
CCTGACCCAC AGATGTTATT GAGTTTATTA GCAGAGCTGA GTGTTGAGCC AGAGCAAGCG
GTTATGATTG GAGATACTAA TCATGATATG CAAATGGCTC AAGCAGCGGG TATTGATAGA
ATAGGCATTA CCTTAGGTGT GCATGATCGA GAGATATTAA ACCACTATCA ACCAATAGCC
GTTGTTGACT CCCTTATCGA GTTACAACAG TTATTATTAC CAGTAGTAGA ACACTGA
 
Protein sequence
MYKLVIFDWD GTLMDSIARI VSSMQAAADH CQLTIPTVKG VKDIIGLSLP KALDILFPGA 
SQSQTTALLE QYKFQYVEGD NTPAPLFEDA LSLLKALKDN NRLLAVATGK GRDGLQRVFS
ATQTEHFFHA SRCADEALSK PDPQMLLSLL AELSVEPEQA VMIGDTNHDM QMAQAAGIDR
IGITLGVHDR EILNHYQPIA VVDSLIELQQ LLLPVVEH