| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_1483 |
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| Symbol | |
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| ID | 5869252 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 1668697 |
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| End bp | 1669371 |
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| Gene Length | 675 bp |
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| Protein Length | 224 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641546590 |
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| Product | HAD family hydrolase |
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| Protein accession | YP_001667724 |
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| Protein GI | 167032493 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0546] Predicted phosphatases |
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| TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.0762089 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 47 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAAGG GCTATGAGCT ACTGATTTTC GACTGGGACG GCACGCTGGC TGATTCCATC
GGGCGTATCG TCGAGGCGAT GAATGCCGCC GCCGAGCGTG CTGGCGAGGC GCCCAGTGGC
GACGATGCAG TCAAGGGCAT CATCGGCCTG GCCCTGGGCG AGGCCATTCA TACGCTGTAC
CCGCACCTGG CGCCTGCGCA GGTGGAGCGC TTTCGTCAGC ACTATGCCGA TATCTACATG
GCGCTGGATC AGCAGCCCTC GCCGTTGTTC GAGGGCGTGG TCGAGTCGCT GGATGCCTTC
CGCGCCGAGG GTTACCGCCT GGCGGTGGCC ACCGGCAAAG CTCGTCGCGG GTTGGATCGG
GTGCTCAAGG CCAATGGTTG GGAGCAGTTC TTCGACATCA CCCGCGCTGC CGACGAAACC
CGTGGTAAAC CGCACCCGCT GATGCTTGAG GAGATCCTCG CGCATTGCGG CGTCGAACCG
GGGCGTGCGC TGATGGTCGG AGATTCTGCA TTCGATCTGC AGATGGCCAG CAATGCCGGC
ATGCATTCGG TGGCGGTGGG CTATGGTGCC ATGTCGCTAC AGGCGCTGGC CGAGTTTGGG
CCGCAGGTTT GCATCGATCA CTTTTCCCAG CTGCGCGAGT GGCTGGGTGG TACTGCAATT
CCACTTCCAA GGTAG
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| Protein sequence | MKKGYELLIF DWDGTLADSI GRIVEAMNAA AERAGEAPSG DDAVKGIIGL ALGEAIHTLY
PHLAPAQVER FRQHYADIYM ALDQQPSPLF EGVVESLDAF RAEGYRLAVA TGKARRGLDR
VLKANGWEQF FDITRAADET RGKPHPLMLE EILAHCGVEP GRALMVGDSA FDLQMASNAG
MHSVAVGYGA MSLQALAEFG PQVCIDHFSQ LREWLGGTAI PLPR
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