| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BTH_I1709 |
|---|
| Symbol | |
|---|
| ID | 3847099 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia thailandensis E264 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007651 |
|---|
| Strand | + |
|---|
| Start bp | 1920416 |
|---|
| End bp | 1921084 |
|---|
| Gene Length | 669 bp |
|---|
| Protein Length | 222 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 637841378 |
|---|
| Product | haloacid dehalogenase-like hydrolase |
|---|
| Protein accession | YP_442244 |
|---|
| Protein GI | 83718563 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0546] Predicted phosphatases |
|---|
| TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.0748768 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACACGCA TGGCACGACA GCAATTTGAT CTGATCGTCT TCGACTGGGA CGGCACGCTG
ATGGATTCGA CCGCGCACAT CGCGCAGTGC ATCCAGGCCG CGTGCCGGGA TCTCGGCGTG
CCCGCGCCGT CCGACGAGGC GGCCCGCTAC GTGATCGGGC TCGGCCTGCG CGACGCGCTC
GCCGTGACCG CGCCGAGCGT CGATCCCGCC GACTATCCGC GGCTCGCCGA GCGCTACCGG
TTCCACTATC TGATCAAGGA CCAGCGAACC GAGCTCTTCG GCGGCGTGCG CGAAATGCTG
GAAGAACTGC GCGACACGGG CTACCTGCTC GCCGTCGCGA CGGGCAAGGG GCGCGTCGGG
TTGAATCGCG CGCTCGATCA GGCGAAGCTC ACGAGCCTCT TCGACGCCAC GCGCTGCGCG
GACGAGACGT TCTCGAAGCC GCATCCGGCG ATGCTGCAGG AATTGTCGCG CGAACTGGGG
CAGGATCTGG CGCGCACCGT GATGATCGGC GACACGACGC ACGACCTGCA GATGGCGGCG
AGCGCCGGCG CGGCGGGCAT CGGCGTCGCG TACGGCGCGC ATTCGGCTGA CGCGCTCGCG
GCGCTGTCGC CGCGCTTCGT CGCGCCCGAC GTCGCATCGC TCGCCAGTTG GCTGCGGGAG
CACGCATGA
|
|---|
| Protein sequence | MTRMARQQFD LIVFDWDGTL MDSTAHIAQC IQAACRDLGV PAPSDEAARY VIGLGLRDAL
AVTAPSVDPA DYPRLAERYR FHYLIKDQRT ELFGGVREML EELRDTGYLL AVATGKGRVG
LNRALDQAKL TSLFDATRCA DETFSKPHPA MLQELSRELG QDLARTVMIG DTTHDLQMAA
SAGAAGIGVA YGAHSADALA ALSPRFVAPD VASLASWLRE HA
|
|---|
| |