Gene Msil_2100 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMsil_2100 
Symbol 
ID7091466 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylocella silvestris BL2 
KingdomBacteria 
Replicon accessionNC_011666 
Strand
Start bp2276259 
End bp2276906 
Gene Length648 bp 
Protein Length215 aa 
Translation table11 
GC content67% 
IMG OID643465424 
ProductHAD-superfamily hydrolase, subfamily IA, variant 1 
Protein accessionYP_002362401 
Protein GI217978254 
COG category[R] General function prediction only 
COG ID[COG0546] Predicted phosphatases 
TIGRFAM ID[TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones60 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAACTCG TGATCTTCGA CATTGACGGG ACCCTGGTCG ACAGTCAGGC GTTCATTCTC 
GAGGCGCAGC GGCGCGCCTT CGCGGCGCAC GCGATGGCAG CGCCAAGCCG CGAGGCGTCG
CTCGCGATCG TCGGCCTGTC GCTGCATGAG GCGTTCAGCG TGCTTGCCGG GCCGGACGGC
CCCATCGAAA GCCTGTCCGA GGCCTATCGG GCGGCATGGG CCGAAATTCG CGCCAATCCG
GATTACGAAG AGCCATTTTA TCCCGGCGCG CGCGAGGCGG TCGCGACGCT TGCCGAAAAC
GCCGGGGTGA CGCTCGGCGT CGCCACGGGC AAGGCGCGCC GCGGCGTCGA CCACCTTTTC
GCGCGGACGG GATGGGCCGA TGTCTTTCGC ACCGTTCAGA CCTCCGACGA TCATCCCTCC
AAACCCGCGC CGAACATGAT CCTTGCCGCC CTCGCCGAAA TCGGGGCGGG TCCGGCCACA
ACCCTGATGA TTGGCGACAC CAGCTTCGAC ATGGAGATGG CGCGCGCGGC CGGCGTGCGG
CCGATCGGCG TCGCCTGGGG CTACCATGAC CGCGCCGCGC TCGAAGCCGC CGGCGCCGAG
CGCATTGTTG CGGATTTCGC CGAATTGCTG CATTTCATCG GTCCATGA
 
Protein sequence
MKLVIFDIDG TLVDSQAFIL EAQRRAFAAH AMAAPSREAS LAIVGLSLHE AFSVLAGPDG 
PIESLSEAYR AAWAEIRANP DYEEPFYPGA REAVATLAEN AGVTLGVATG KARRGVDHLF
ARTGWADVFR TVQTSDDHPS KPAPNMILAA LAEIGAGPAT TLMIGDTSFD MEMARAAGVR
PIGVAWGYHD RAALEAAGAE RIVADFAELL HFIGP