Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Msil_2100 |
Symbol | |
ID | 7091466 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylocella silvestris BL2 |
Kingdom | Bacteria |
Replicon accession | NC_011666 |
Strand | + |
Start bp | 2276259 |
End bp | 2276906 |
Gene Length | 648 bp |
Protein Length | 215 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 643465424 |
Product | HAD-superfamily hydrolase, subfamily IA, variant 1 |
Protein accession | YP_002362401 |
Protein GI | 217978254 |
COG category | [R] General function prediction only |
COG ID | [COG0546] Predicted phosphatases |
TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED [TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 60 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAAACTCG TGATCTTCGA CATTGACGGG ACCCTGGTCG ACAGTCAGGC GTTCATTCTC GAGGCGCAGC GGCGCGCCTT CGCGGCGCAC GCGATGGCAG CGCCAAGCCG CGAGGCGTCG CTCGCGATCG TCGGCCTGTC GCTGCATGAG GCGTTCAGCG TGCTTGCCGG GCCGGACGGC CCCATCGAAA GCCTGTCCGA GGCCTATCGG GCGGCATGGG CCGAAATTCG CGCCAATCCG GATTACGAAG AGCCATTTTA TCCCGGCGCG CGCGAGGCGG TCGCGACGCT TGCCGAAAAC GCCGGGGTGA CGCTCGGCGT CGCCACGGGC AAGGCGCGCC GCGGCGTCGA CCACCTTTTC GCGCGGACGG GATGGGCCGA TGTCTTTCGC ACCGTTCAGA CCTCCGACGA TCATCCCTCC AAACCCGCGC CGAACATGAT CCTTGCCGCC CTCGCCGAAA TCGGGGCGGG TCCGGCCACA ACCCTGATGA TTGGCGACAC CAGCTTCGAC ATGGAGATGG CGCGCGCGGC CGGCGTGCGG CCGATCGGCG TCGCCTGGGG CTACCATGAC CGCGCCGCGC TCGAAGCCGC CGGCGCCGAG CGCATTGTTG CGGATTTCGC CGAATTGCTG CATTTCATCG GTCCATGA
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Protein sequence | MKLVIFDIDG TLVDSQAFIL EAQRRAFAAH AMAAPSREAS LAIVGLSLHE AFSVLAGPDG PIESLSEAYR AAWAEIRANP DYEEPFYPGA REAVATLAEN AGVTLGVATG KARRGVDHLF ARTGWADVFR TVQTSDDHPS KPAPNMILAA LAEIGAGPAT TLMIGDTSFD MEMARAAGVR PIGVAWGYHD RAALEAAGAE RIVADFAELL HFIGP
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