| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_3807 |
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| Symbol | |
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| ID | 5193625 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 4268057 |
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| End bp | 4268731 |
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| Gene Length | 675 bp |
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| Protein Length | 224 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640588274 |
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| Product | HAD family hydrolase |
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| Protein accession | YP_001269115 |
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| Protein GI | 148549013 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0546] Predicted phosphatases |
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| TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.118188 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAAAG GCTATGAGCT ACTGATCTTT GACTGGGACG GCACCCTGGC CGATTCCATT
GGTCGTATCG TCGAGGCCAT GAATGTCGCC GCAGAGCGTG CCGGCGAGGC ACAGAGCAGC
GACGATGCGG TCAAGGGCAT CATCGGCCTG GCCTTGGACG AGGCGATCCA CACCTTGTAC
CCGCACCTGG TGCCCGCAGA GGTTGCCAGC TTCCGCCAGC ACTATGCCGA TGTCTACGTT
GCACTGGATC AGCAACCTTC GCCGCTGTTC GATGGCGTGG TCGAGTCGCT GGATGCCTTT
CGCGCCGAGG GTTACCGCCT GGCGGTGGCC ACCGGCAAGG CCCGTCGCGG GTTGGATCGG
GTGCTCAAGG CTAATGGCTG GGAGCGTTTC TTCGACATCA CCCGTGCCGC TGACGAGACC
CGTGGCAAGC CACACCCGCT GATGCTTGAG GAAATCCTCG GGCATTGTGG CGTCGAACCG
TCGCGTGCGC TGATGGTCGG AGATTCGGCA TTCGACCTGC AGATGGCCAG CAATGCCGGC
ATGCATTCGG TGGCGGTTGG TTATGGTGCC ATGTCGCTGC AGGCGCTGGC CGAGTTTGGC
CCGCAGGTAT GTATCGATCA CTTTTCCCAG TTGCGCGAGT GGCTGGGTGG TTCCGCAATT
CCATTTCCAA GGTAG
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| Protein sequence | MKKGYELLIF DWDGTLADSI GRIVEAMNVA AERAGEAQSS DDAVKGIIGL ALDEAIHTLY
PHLVPAEVAS FRQHYADVYV ALDQQPSPLF DGVVESLDAF RAEGYRLAVA TGKARRGLDR
VLKANGWERF FDITRAADET RGKPHPLMLE EILGHCGVEP SRALMVGDSA FDLQMASNAG
MHSVAVGYGA MSLQALAEFG PQVCIDHFSQ LREWLGGSAI PFPR
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