Gene Bcen_0633 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_0633 
Symbol 
ID4093435 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008060 
Strand
Start bp681801 
End bp682460 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content70% 
IMG OID638013899 
ProductHAD family hydrolase 
Protein accessionYP_620516 
Protein GI107022189 
COG category[R] General function prediction only 
COG ID[COG0546] Predicted phosphatases 
TIGRFAM ID[TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.32289 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTCGAC AGCAATTTGA CCTGATCGTC TTCGACTGGG ACGGCACGCT GATGGATTCG 
ACTGCGCACA TCGCGCACAG CATCCAGGCG GCATGCCGCG ATCTCGGCCT GCCCACGCCG
TCCGACGAGG CGTCCCGTTA CGTGATCGGC CTCGGCCTGC GCGATGCGCT GCAGATCACG
GCGCCGACCC TCGATCCGTC CGACTACGCG CGGCTGGCCG AGCGCTACCG CTATCACTAT
CTGCTCGACG ACCAGCGCAT CGAGCTGTTC GCCGGTGTGC GCGAGCTGCT CGCCGAGCTG
CGCGACACGG GCTACCTGCT CGCCGTCGCG ACCGGCAAGG GGCGGGTCGG GCTAAACCGC
GTGCTCGACC AGTCGAAGCT GACGAGCTGG TTCGACGCGA CGCGCTGCGC GGACGAGACG
TTCTCGAAGC CGCATCCGGC GATGCTGCAC GAGTTGTCGC GGGAATTGGG GCAGGACCTG
TCGCGCACCG TGATGATCGG CGACACCACG CACGACCTGC AAATGGCCGC CAGCGCCGGC
GCAGCCGGCG TCGGCGTCGC GTACGGCGCG CATACGGCCG ATGCGCTGGC GGCGCTCACG
CCGCGCTTCG TCGCGCCGGA CGTCGGCGCG CTGGCCGCAT GGCTGCGGGA GCACGCATGA
 
Protein sequence
MARQQFDLIV FDWDGTLMDS TAHIAHSIQA ACRDLGLPTP SDEASRYVIG LGLRDALQIT 
APTLDPSDYA RLAERYRYHY LLDDQRIELF AGVRELLAEL RDTGYLLAVA TGKGRVGLNR
VLDQSKLTSW FDATRCADET FSKPHPAMLH ELSRELGQDL SRTVMIGDTT HDLQMAASAG
AAGVGVAYGA HTADALAALT PRFVAPDVGA LAAWLREHA