| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_1907 |
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| Symbol | |
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| ID | 1043175 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | + |
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| Start bp | 2152274 |
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| End bp | 2152948 |
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| Gene Length | 675 bp |
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| Protein Length | 224 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637145314 |
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| Product | HAD superfamily hydrolase |
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| Protein accession | NP_744061 |
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| Protein GI | 26988636 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0546] Predicted phosphatases |
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| TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 0 |
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| Fosmid unclonability p-value | 0.00000027861 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | unclonable |
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Sequence |
| Gene sequence | ATGAAAAAAG GCTATGAGCT ACTGATCTTC GACTGGGACG GCACCCTAGC CGATTCCATT
GGGCGTATCG TCGAGGCCAT GAATGTCGCC GCAGAGCGTG CCGGCGAGGC GCAGAGCAGC
GACGCTGCGG TCAAGGGTAT CATCGGTCTG GCCTTGGACG AGGCGATCCA CACCCTGTAC
CCGCACCTGG CGCCTGCAGA GGTTGCCAGC TTCCGCCAGC ACTATGCCGA TGTCTACGTT
GCGCTGGATC AGCAACCTTC GCCGTTGTTC GATGGCGTGG TCGAGTCGCT GGATGCCTTT
CGCGCCGAGG GTTACCGCCT GGCGGTGGCC ACCGGCAAGG CCCGTCGCGG GCTGGATCGG
GTGCTCAAGG CCAATGGCTG GGAGCGGTTC TTCGACATCA CCCGCGCCGC TGACGAGACC
CGTGGCAAGC CACACCCGCT GATGCTTGAG GAAATCCTCG GGCATTGTGG CGTCGAACCG
TCGCGTGCGC TGATGGTCGG AGATTCGGCA TTCGACTTGC AGATGGCCAG CAATGCCGGC
ATGCATTCGG TGGCGGTTGG CTATGGTGCC ATGTCGCTGC AGGCGCTGGC CGAGTTTGGC
CCGCAGGTAT GCATCGATCA CTTTTCCCAG TTGCGCGAGT GGCTGGGTGG TTCCGCAATT
CCACTTCCAA GGTAG
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| Protein sequence | MKKGYELLIF DWDGTLADSI GRIVEAMNVA AERAGEAQSS DAAVKGIIGL ALDEAIHTLY
PHLAPAEVAS FRQHYADVYV ALDQQPSPLF DGVVESLDAF RAEGYRLAVA TGKARRGLDR
VLKANGWERF FDITRAADET RGKPHPLMLE EILGHCGVEP SRALMVGDSA FDLQMASNAG
MHSVAVGYGA MSLQALAEFG PQVCIDHFSQ LREWLGGSAI PLPR
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