Gene Pcryo_0284 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcryo_0284 
Symbol 
ID4035616 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter cryohalolentis K5 
KingdomBacteria 
Replicon accessionNC_007969 
Strand
Start bp343528 
End bp344232 
Gene Length705 bp 
Protein Length234 aa 
Translation table11 
GC content44% 
IMG OID637972733 
ProductHAD family hydrolase 
Protein accessionYP_579552 
Protein GI93005115 
COG category[R] General function prediction only 
COG ID[COG0546] Predicted phosphatases 
TIGRFAM ID[TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.251372 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCAAA CTACTACAAT GATTCCTGCT CAGAGTTCTC AGTCAGCCAA CCCGCATCAT 
TTAGCCGATA AGACCTTAAT CATATTTGAT TGGGACGGTA CGCTAATGGA TTCGATTGGC
TTGATTGTTG AAGCTATGCA TATAGCAGGT GAGGCACATG GCTTCAAGAC AACTGATAAG
GCCGTCAAAG ATATTATTGG GTTAAGTTTA ATGAAGGGCA TTGAGCTTTT ATATCCGTAT
TCAAGCGATA AGCAAAAACT GTTAATTCAA CAAAGTTACG CAGATTATTA TATTGCTAAC
AGCCAGCGTA CACCGTTCTT TGCGCCGATA GAAAATATGC TACAAACCTT GCAGCGGCAA
AATCGTCAGC TTGCAGTTGC GACAGGTAAA AAACGTAAGG GTCTAGATCG TGTTTTGGAC
GCTTCAGATA GCCATCATTA TTTTGTTATG ACGCGCTGTG CGGATGAAGC AGGCTCCAAA
CCTGACCCAC AAATGCTGAC GGATATTTTG CAATATACCG AACAGCAAAT CTCTGACGCC
GTATTTATCG GTGATAGCAT TTATGATATT CAAATGGCAA ACAGTCTGGG CATGACCAGT
ATTGCAGTTA ATTATGGTAC CGCCAGCAGC GACGAGCTTG CCGCACAGCA GCCCACGTAT
CAGGTGAACA CGCCCCAAGC GTTGGCACAA TTATTATGTG CTTAA
 
Protein sequence
MSQTTTMIPA QSSQSANPHH LADKTLIIFD WDGTLMDSIG LIVEAMHIAG EAHGFKTTDK 
AVKDIIGLSL MKGIELLYPY SSDKQKLLIQ QSYADYYIAN SQRTPFFAPI ENMLQTLQRQ
NRQLAVATGK KRKGLDRVLD ASDSHHYFVM TRCADEAGSK PDPQMLTDIL QYTEQQISDA
VFIGDSIYDI QMANSLGMTS IAVNYGTASS DELAAQQPTY QVNTPQALAQ LLCA