Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pcryo_0284 |
Symbol | |
ID | 4035616 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter cryohalolentis K5 |
Kingdom | Bacteria |
Replicon accession | NC_007969 |
Strand | + |
Start bp | 343528 |
End bp | 344232 |
Gene Length | 705 bp |
Protein Length | 234 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 637972733 |
Product | HAD family hydrolase |
Protein accession | YP_579552 |
Protein GI | 93005115 |
COG category | [R] General function prediction only |
COG ID | [COG0546] Predicted phosphatases |
TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED [TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.251372 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCCAAA CTACTACAAT GATTCCTGCT CAGAGTTCTC AGTCAGCCAA CCCGCATCAT TTAGCCGATA AGACCTTAAT CATATTTGAT TGGGACGGTA CGCTAATGGA TTCGATTGGC TTGATTGTTG AAGCTATGCA TATAGCAGGT GAGGCACATG GCTTCAAGAC AACTGATAAG GCCGTCAAAG ATATTATTGG GTTAAGTTTA ATGAAGGGCA TTGAGCTTTT ATATCCGTAT TCAAGCGATA AGCAAAAACT GTTAATTCAA CAAAGTTACG CAGATTATTA TATTGCTAAC AGCCAGCGTA CACCGTTCTT TGCGCCGATA GAAAATATGC TACAAACCTT GCAGCGGCAA AATCGTCAGC TTGCAGTTGC GACAGGTAAA AAACGTAAGG GTCTAGATCG TGTTTTGGAC GCTTCAGATA GCCATCATTA TTTTGTTATG ACGCGCTGTG CGGATGAAGC AGGCTCCAAA CCTGACCCAC AAATGCTGAC GGATATTTTG CAATATACCG AACAGCAAAT CTCTGACGCC GTATTTATCG GTGATAGCAT TTATGATATT CAAATGGCAA ACAGTCTGGG CATGACCAGT ATTGCAGTTA ATTATGGTAC CGCCAGCAGC GACGAGCTTG CCGCACAGCA GCCCACGTAT CAGGTGAACA CGCCCCAAGC GTTGGCACAA TTATTATGTG CTTAA
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Protein sequence | MSQTTTMIPA QSSQSANPHH LADKTLIIFD WDGTLMDSIG LIVEAMHIAG EAHGFKTTDK AVKDIIGLSL MKGIELLYPY SSDKQKLLIQ QSYADYYIAN SQRTPFFAPI ENMLQTLQRQ NRQLAVATGK KRKGLDRVLD ASDSHHYFVM TRCADEAGSK PDPQMLTDIL QYTEQQISDA VFIGDSIYDI QMANSLGMTS IAVNYGTASS DELAAQQPTY QVNTPQALAQ LLCA
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