| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_2768 |
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| Symbol | |
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| ID | 5455362 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 2966360 |
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| End bp | 2967073 |
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| Gene Length | 714 bp |
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| Protein Length | 237 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640878349 |
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| Product | HAD family hydrolase |
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| Protein accession | YP_001414033 |
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| Protein GI | 154253209 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0546] Predicted phosphatases |
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| TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 0.654297 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 52 |
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| Fosmid unclonability p-value | 0.45248 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTTTTC CCCTCCGCCT CGTCGTCTTC GATTGCGACG GAACGCTGAT CGACAGCCAG
CATATGATCG TCGCCGCCAT GGCCCATGCC TTCGAGACGT ATGGGCTCGA AAACCTGCCG
CGCGAGAAGG TGCTCTCCAT TGTCGGCCTC TCGCTCGACG AGGCGATCCA TGCGCTGGTG
CCCGATGTCG AGGAGCCGCT TCGCCGCCGC CTTACCGAGG CCTACAAGGG CGCTTTCCAC
GAATTGCGCA ACCGCAAGGA GCTCGCCGAG CCGCTTTTCC CCGGCGTGCG CGAGACGCTG
GAGGCGCTCG CCGCGCGCGA GAACGTGCTG CTCGGCATCG CCACCGGCAA GTCGCAGCGG
GGCCTCCGCC ACGCGCTCGA AACGCATGAA CTCGGTCATT ATTTCGTCAC GTTGCAGACG
GCGGATGACG CGCCTTCCAA GCCCCATCCT GAAATGCTCC GCCGCGCCAT GCGGGCGGCG
GGCGCGGATG CGCGAGACAC CGTGCTGGTC GGCGATACGA GCTACGACAT GGCGATGGCG
CGGGCGGCGG GCGCGCATGC GTTCGGCGTC GATTGGGGCT ATCATGCGCC GGAGATGCTG
CGCGTCGCCG GCGCCGATAT CGTGCTGTCG GATTTTTCCG GCCTCGCCCC GGCGCTCGAT
GCGATCTGGA CTGACAGCAA TGTCAAAGAG ACGGAACCCG CCGGAGGAGC ATAG
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| Protein sequence | MAFPLRLVVF DCDGTLIDSQ HMIVAAMAHA FETYGLENLP REKVLSIVGL SLDEAIHALV
PDVEEPLRRR LTEAYKGAFH ELRNRKELAE PLFPGVRETL EALAARENVL LGIATGKSQR
GLRHALETHE LGHYFVTLQT ADDAPSKPHP EMLRRAMRAA GADARDTVLV GDTSYDMAMA
RAAGAHAFGV DWGYHAPEML RVAGADIVLS DFSGLAPALD AIWTDSNVKE TEPAGGA
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