| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_4164 |
|---|
| Symbol | |
|---|
| ID | 3714929 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas fluorescens Pf0-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007492 |
|---|
| Strand | - |
|---|
| Start bp | 4699484 |
|---|
| End bp | 4700065 |
|---|
| Gene Length | 582 bp |
|---|
| Protein Length | 193 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | |
|---|
| Product | HAD family hydrolase |
|---|
| Protein accession | YP_349892 |
|---|
| Protein GI | 77460385 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.0540485 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.889807 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCACTCGG CGTCCGGGCG TTCAGGTTTC GAGTTGCGTG ATGATTTTGC AGTCAAAGGC
ATTATTGGTC TGGGCTTGCC CGAGGCGATC CGCACGCTGT ATCCCGAAAT CAGCGATGCC
GAAATGACCT TGTTCCGCGA GTATTACGCC GATCACTACA TCGCTGCAGA AGCCGTACCT
TCGCCGTTGT TCGAAGGCGT AGTCGAGTCG ATGGAGTCCT TTCGCGAGCA GGGCTATCAC
CTGGCGGTCG CGACCGGCAA GAATCGTCGC GGGCTGGATC GGGTGCTCAA GGCCAATGGC
TGGGAAGATT ATTTCGATAT CACCCGTGCT GCCGATGAAA CTGCGAGCAA GCCGCACCCT
CTGATGCTGG AGCAGATCCT CGCTCACTGC GGTGTGCGTG CCGAGCAGGC GCTGATGGTC
GGTGACTCGT CCTTCGATCT GTTGATGGCG CGCAATGCGG GGATGGATTC GGTGGCGGTC
AGCTATGGCG CGCAATCGAT CGAATCGCTG CAACAGTTCG AGCCGCGACT GTCGATCGAC
CATTTTTCCG AATTGCATGC CTGGCTGGGG CAGCAGGCTT AA
|
|---|
| Protein sequence | MHSASGRSGF ELRDDFAVKG IIGLGLPEAI RTLYPEISDA EMTLFREYYA DHYIAAEAVP
SPLFEGVVES MESFREQGYH LAVATGKNRR GLDRVLKANG WEDYFDITRA ADETASKPHP
LMLEQILAHC GVRAEQALMV GDSSFDLLMA RNAGMDSVAV SYGAQSIESL QQFEPRLSID
HFSELHAWLG QQA
|
|---|
| |