Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | AFE_2218 |
Symbol | |
ID | 7136570 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
Kingdom | Bacteria |
Replicon accession | NC_011761 |
Strand | - |
Start bp | 1966631 |
End bp | 1967314 |
Gene Length | 684 bp |
Protein Length | 227 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 643530586 |
Product | HAD-superfamily hydrolase, subfamily IA |
Protein accession | YP_002426616 |
Protein GI | 218665437 |
COG category | [R] General function prediction only |
COG ID | [COG0546] Predicted phosphatases |
TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED [TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATTTTGC CCCCTGATGA TTGCCGACTG ATCATTTTCG ATTGGGACGG CACCCTCATG GACAGCATTT CTACCATCTG CGGCTGTCTG GCCCATGCTT TTGGCTATGC AGGGCTGGCG GATCGCGGAA CGCAGCAGTA CCGGGAAATC ATCGGATTGG GACTGGAAGA CGCCTTGGCG GCTCTCGCCC CCGATGCGGA TAGGTCTACC CGGGAACGGA TTCTGGCGGG TTACCGGGAG TGCTTTTTCG GCACGCCGGT CCGTGAAATG CCCCTCTTTC CGGGGGTGGA AGACACGGTG GTGCAACTCG CCGATGCTGG CTATGAGATC GCCGTGGCCA CCGGCAAAGC CCGCCGCGGC CTGGATCGGG TGCTGGGCGA GCATCCCCGA CTCGCCGCTT GCATCAGCGC CAGTCGCTGT GCCGATGAAA GCCGCTCCAA ACCAGACCCC CTGATGCTCC GCGAACTGCT ACGGCACTAC GATCTGCCCC CAGCGGCGGC CATCATGGTG GGCGACACCG TGCACGACAT GGAAATGGCC GTGGCCGCCG GGGTCTTGCC GGTGGGGGTG CTCTGCGGCG TACACGGCGC GGAACGCCTG GATGCCAGCG GTGCCGCGAT GTGTTTTGCC GACCCCACCG CCTTGCCTGG GTGGCTCATT CGCAAACGCC CCAGGTTTGA ATAG
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Protein sequence | MILPPDDCRL IIFDWDGTLM DSISTICGCL AHAFGYAGLA DRGTQQYREI IGLGLEDALA ALAPDADRST RERILAGYRE CFFGTPVREM PLFPGVEDTV VQLADAGYEI AVATGKARRG LDRVLGEHPR LAACISASRC ADESRSKPDP LMLRELLRHY DLPPAAAIMV GDTVHDMEMA VAAGVLPVGV LCGVHGAERL DASGAAMCFA DPTALPGWLI RKRPRFE
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