| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_2502 |
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| Symbol | |
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| ID | 5662895 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | - |
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| Start bp | 3047445 |
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| End bp | 3048047 |
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| Gene Length | 603 bp |
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| Protein Length | 200 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 641237128 |
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| Product | HAD family hydrolase |
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| Protein accession | YP_001502357 |
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| Protein GI | 157962323 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0546] Predicted phosphatases |
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| TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.396303 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATTCCA TCAGTAAAAT TGTTACTTGT ATGCAGCAGA TGGCTCACTC GCTATCTCTT
GTTTGCCCAT CAGAGTTGGC GGTACGGGAT GTGATTGGAC TATCGATGGA AGAGGCGTTA
AAAACCTTAT ATCCAGCTTT GCCTACAATT GATTTCGACC CCATGATTAA TTCGTATAAA
GAGCATTACT TGACGCTTAA TACCACACCA AGCCCATTGT TTGACGGTAG TGAAATGCTA
CTGAATGAGC TGAGTACACG TGATTATCGT TTAGCTGTTG CTACGGGTAA AGGGCGCAAC
GGTTTGAATC GCGTGCTAAG TGAAACTGGA TTAGCAAGGC ATTTTGAATC GAGTCGATGC
GCCGATGAGT CAAAGAGTAA ACCAAATCCA GATATGCTCT ATGACTTATT AGAAGAGCTT
AAGGTTAAGC CTGAACGTGC GCTTATGGTT GGAGACTCTC TTCATGATCT CAATATGGCA
AATAATGCAG GGGTTGATTC AGTTGGCGTG AGTTATGGGG CTCATAGTGA GTCAAAGCTA
TTGTTAGCTA AGCCAAAGGC TATTATCCAT AGACCATTAG AGTTACTTAA CGTATTAGCC
TAG
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| Protein sequence | MDSISKIVTC MQQMAHSLSL VCPSELAVRD VIGLSMEEAL KTLYPALPTI DFDPMINSYK
EHYLTLNTTP SPLFDGSEML LNELSTRDYR LAVATGKGRN GLNRVLSETG LARHFESSRC
ADESKSKPNP DMLYDLLEEL KVKPERALMV GDSLHDLNMA NNAGVDSVGV SYGAHSESKL
LLAKPKAIIH RPLELLNVLA
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