| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_3084 |
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| Symbol | |
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| ID | 4690160 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | - |
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| Start bp | 3254596 |
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| End bp | 3255255 |
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| Gene Length | 660 bp |
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| Protein Length | 219 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 639836097 |
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| Product | HAD family hydrolase |
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| Protein accession | YP_983304 |
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| Protein GI | 121605975 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0546] Predicted phosphatases |
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| TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAACCA GAAACTTTGA CCTGATCGCC TTCGACTGGG ACGGCACGCT GTTTGACTCC
ACCCAGATCA TCGTGCGCTG CATCCAGGCG GCGGTGTGCG ATGTGGGCGG CAAGGAGCCG
ACTGAAAAGG CTGCCGCCTA CGTCATCGGC ATGGCCCTCA TGCAGGCGCT GGCCCATGCC
GCGCCCGACG TGCCGCCTGA AAAGTACCCG GAACTGGGCG CGCGCTACCG GCATCACTAC
GCCAGGCACT TCAACGACCT GAGCCTGTTT GCTGGCGTTT TGCCGCTGCT CGAAGCCCTC
AAGGCGCGCG GCCACCGGCT GGCGGTGGCC ACCGGAAAAT CACGGCGCGG ACTGGACGAG
GCGCTGCAAA GCGTCGAACT GAAAGGCGTT TTTGATGGCT CCCGCACGGC CGACGAAACC
GCCGGCAAAC CCGACCCGCT GATGCTGCAC GAGCTGATGG CGCAGTTTGA TCTTCCCGCC
AGCAGGATAT TGATGATCGG CGACACCACG CACGACCTGC AGATGGCGCT GAACGCCGGC
TGCGCCAGCG TCGGCGTGAG CTACGGCGCG CATGAGCCCG AGGCCTTCAC GGTGCTCAAT
CCGCTGCATG TGGCGCACTC GGTGCAGGAT TTGCAGGACT GGCTGCTGGC CAACGGTTGA
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| Protein sequence | MQTRNFDLIA FDWDGTLFDS TQIIVRCIQA AVCDVGGKEP TEKAAAYVIG MALMQALAHA
APDVPPEKYP ELGARYRHHY ARHFNDLSLF AGVLPLLEAL KARGHRLAVA TGKSRRGLDE
ALQSVELKGV FDGSRTADET AGKPDPLMLH ELMAQFDLPA SRILMIGDTT HDLQMALNAG
CASVGVSYGA HEPEAFTVLN PLHVAHSVQD LQDWLLANG
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