More than 300 homologs were found in PanDaTox collection
for query gene Nham_1198 on replicon NC_007964
Organism: Nitrobacter hamburgensis X14



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007964  Nham_1198  haloacid dehalogenase-like hydrolase  100 
 
 
220 aa  443  1.0000000000000001e-124  Nitrobacter hamburgensis X14  Bacteria  normal  n/a   
 
 
-
 
NC_007406  Nwi_0649  HAD family hydrolase  90 
 
 
220 aa  400  1e-111  Nitrobacter winogradskyi Nb-255  Bacteria  normal  normal 
 
 
-
 
NC_008576  Mmc1_2406  HAD family hydrolase  46.57 
 
 
219 aa  152  2.9999999999999998e-36  Magnetococcus sp. MC-1  Bacteria  normal  0.173268  normal  0.1338 
 
 
-
 
NC_004578  PSPTO_3590  HAD-superfamily hydrolase  34.21 
 
 
218 aa  87.4  2e-16  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.906124  n/a   
 
 
-
 
NC_009952  Dshi_1676  HAD-like hydrolase  38.1 
 
 
219 aa  84.3  0.000000000000001  Dinoroseobacter shibae DFL 12  Bacteria  normal  0.653252  normal  0.340852 
 
 
-
 
NC_014210  Ndas_1550  HAD-superfamily hydrolase, subfamily IA, variant 3  36.17 
 
 
249 aa  84.3  0.000000000000001  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal  0.204001 
 
 
-
 
NC_007952  Bxe_B1761  HAD family hydrolase  32.11 
 
 
230 aa  81.3  0.00000000000001  Burkholderia xenovorans LB400  Bacteria  normal  0.0120798  normal  0.0416472 
 
 
-
 
NC_007650  BTH_II0272  HAD-superfamily hydrolase  32.8 
 
 
221 aa  80.1  0.00000000000002  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_010338  Caul_0320  HAD family hydrolase  31.25 
 
 
241 aa  80.5  0.00000000000002  Caulobacter sp. K31  Bacteria  normal  0.288784  normal 
 
 
-
 
NC_014248  Aazo_4442  HAD superfamily hydrolase  29.05 
 
 
228 aa  80.5  0.00000000000002  'Nostoc azollae' 0708  Bacteria  normal  0.536318  n/a   
 
 
-
 
NC_012669  Bcav_2245  HAD-superfamily hydrolase, subfamily IA, variant 3  36.08 
 
 
247 aa  77  0.0000000000002  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.56873  normal 
 
 
-
 
NC_009954  Cmaq_1114  HAD family hydrolase  30.81 
 
 
218 aa  75.9  0.0000000000004  Caldivirga maquilingensis IC-167  Archaea  normal  0.35546  normal 
 
 
-
 
NC_009784  VIBHAR_05174  phosphoglycolate phosphatase  35.88 
 
 
256 aa  75.1  0.0000000000007  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_010816  BLD_0792  beta-phosphoglucomutase  29.47 
 
 
215 aa  75.1  0.0000000000007  Bifidobacterium longum DJO10A  Bacteria  normal  n/a   
 
 
-
 
NC_004116  SAG0181  HAD superfamily hydrolase  27.08 
 
 
214 aa  74.7  0.000000000001  Streptococcus agalactiae 2603V/R  Bacteria  normal  n/a   
 
 
-
 
NC_009075  BURPS668_A2948  HAD-superfamily hydrolase  32.09 
 
 
221 aa  74.3  0.000000000001  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_007413  Ava_4630  HAD family hydrolase  29.32 
 
 
225 aa  74.7  0.000000000001  Anabaena variabilis ATCC 29413  Bacteria  normal  hitchhiker  0.00554039 
 
 
-
 
NC_013203  Apar_0864  thiamine pyrophosphokinase  30.57 
 
 
454 aa  74.3  0.000000000001  Atopobium parvulum DSM 20469  Bacteria  unclonable  0.000000134495  normal  0.492449 
 
 
-
 
NC_009485  BBta_7216  putative haloacid dehalogenase-like hydrolase  33.7 
 
 
223 aa  73.6  0.000000000002  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_010424  Daud_0525  HAD family hydrolase  29.19 
 
 
209 aa  73.2  0.000000000003  Candidatus Desulforudis audaxviator MP104C  Bacteria  hitchhiker  0.00124351  n/a   
 
 
-
 
NC_009363  OSTLU_10396  predicted protein  32.39 
 
 
168 aa  71.2  0.00000000001  Ostreococcus lucimarinus CCE9901  Eukaryota  normal  normal 
 
 
-
 
NC_007604  Synpcc7942_1351  HAD family hydrolase  30.04 
 
 
236 aa  70.5  0.00000000002  Synechococcus elongatus PCC 7942  Bacteria  decreased coverage  0.00941248  normal 
 
 
-
 
NC_010501  PputW619_2424  HAD family hydrolase  29.26 
 
 
221 aa  69.7  0.00000000003  Pseudomonas putida W619  Bacteria  normal  normal 
 
 
-
 
NC_008312  Tery_2465  HAD family hydrolase  30.77 
 
 
220 aa  69.7  0.00000000003  Trichodesmium erythraeum IMS101  Bacteria  normal  normal 
 
 
-
 
NC_009512  Pput_2602  HAD family hydrolase  29.89 
 
 
227 aa  69.7  0.00000000003  Pseudomonas putida F1  Bacteria  normal  normal  0.852152 
 
 
-
 
NC_010322  PputGB1_2742  HAD family hydrolase  29.35 
 
 
218 aa  69.3  0.00000000004  Pseudomonas putida GB-1  Bacteria  normal  normal 
 
 
-
 
NC_011729  PCC7424_4434  HAD-superfamily hydrolase, subfamily IA, variant 3  31.58 
 
 
217 aa  69.7  0.00000000004  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
NC_009665  Shew185_3926  2-deoxyglucose-6-phosphatase  28.06 
 
 
219 aa  68.6  0.00000000007  Shewanella baltica OS185  Bacteria  hitchhiker  0.00000000238408  n/a   
 
 
-
 
NC_009253  Dred_2449  HAD family hydrolase  29.35 
 
 
217 aa  68.6  0.00000000008  Desulfotomaculum reducens MI-1  Bacteria  normal  0.0190416  n/a   
 
 
-
 
NC_009052  Sbal_3906  2-deoxyglucose-6-phosphatase  28.06 
 
 
219 aa  68.2  0.00000000009  Shewanella baltica OS155  Bacteria  unclonable  0.000000000443869  n/a   
 
 
-
 
NC_007298  Daro_3482  phosphoglycolate phosphatase  29.35 
 
 
226 aa  68.2  0.0000000001  Dechloromonas aromatica RCB  Bacteria  normal  0.824519  normal  0.190106 
 
 
-
 
NC_013946  Mrub_0251  HAD-superfamily hydrolase subfamily IA, variant 3  32.04 
 
 
216 aa  68.2  0.0000000001  Meiothermus ruber DSM 1279  Bacteria  normal  normal  0.822561 
 
 
-
 
NC_010322  PputGB1_1571  HAD family hydrolase  42.22 
 
 
714 aa  67.4  0.0000000002  Pseudomonas putida GB-1  Bacteria  normal  normal  0.882263 
 
 
-
 
NC_009997  Sbal195_4047  2-deoxyglucose-6-phosphatase  28.27 
 
 
219 aa  67  0.0000000002  Shewanella baltica OS195  Bacteria  hitchhiker  0.0000965281  normal  0.234971 
 
 
-
 
NC_008312  Tery_0409  HAD family hydrolase  26.88 
 
 
228 aa  67.4  0.0000000002  Trichodesmium erythraeum IMS101  Bacteria  normal  normal 
 
 
-
 
NC_008578  Acel_1175  HAD family hydrolase  33.16 
 
 
263 aa  67  0.0000000002  Acidothermus cellulolyticus 11B  Bacteria  normal  normal 
 
 
-
 
NC_013235  Namu_2787  HAD-superfamily hydrolase, subfamily IA, variant 3  33.17 
 
 
230 aa  67  0.0000000002  Nakamurella multipartita DSM 44233  Bacteria  hitchhiker  0.00137861  hitchhiker  0.0000132599 
 
 
-
 
NC_010501  PputW619_2172  HAD family hydrolase  42.22 
 
 
710 aa  66.6  0.0000000003  Pseudomonas putida W619  Bacteria  normal  normal 
 
 
-
 
NC_012917  PC1_3475  HAD-superfamily hydrolase, subfamily IA, variant 3  31.25 
 
 
221 aa  66.2  0.0000000004  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_009486  Tpet_1517  HAD family hydrolase  27.62 
 
 
216 aa  65.9  0.0000000004  Thermotoga petrophila RKU-1  Bacteria  normal  n/a   
 
 
-
 
NC_010483  TRQ2_1566  HAD family hydrolase  27.62 
 
 
216 aa  66.2  0.0000000004  Thermotoga sp. RQ2  Bacteria  normal  n/a   
 
 
-
 
NC_013457  VEA_001299  CbbY family protein  29.8 
 
 
216 aa  65.9  0.0000000004  Vibrio sp. Ex25  Bacteria  normal  0.916657  n/a   
 
 
-
 
NC_008025  Dgeo_0096  HAD family hydrolase  33.51 
 
 
238 aa  65.5  0.0000000005  Deinococcus geothermalis DSM 11300  Bacteria  normal  0.803846  normal 
 
 
-
 
NC_013595  Sros_5916  HAD family hydrolase  31.67 
 
 
218 aa  65.5  0.0000000005  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0345843  normal  0.0351614 
 
 
-
 
NC_013457  VEA_000500  putative phosphatase YqaB  31.49 
 
 
185 aa  65.5  0.0000000007  Vibrio sp. Ex25  Bacteria  hitchhiker  0.000081388  n/a   
 
 
-
 
NC_014165  Tbis_1853  HAD-superfamily hydrolase  34.41 
 
 
213 aa  65.1  0.0000000008  Thermobispora bispora DSM 43833  Bacteria  normal  normal 
 
 
-
 
NC_009512  Pput_3689  HAD family hydrolase  41.11 
 
 
707 aa  64.7  0.000000001  Pseudomonas putida F1  Bacteria  normal  normal 
 
 
-
 
NC_002947  PP_2052  HAD superfamily hydrolase  41.11 
 
 
707 aa  64.7  0.000000001  Pseudomonas putida KT2440  Bacteria  normal  0.380026  normal 
 
 
-
 
NC_007778  RPB_1286  HAD family hydrolase  31.18 
 
 
229 aa  64.3  0.000000001  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_007958  RPD_3933  HAD family hydrolase  30.22 
 
 
271 aa  64.7  0.000000001  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_009428  Rsph17025_2709  HAD family hydrolase  29.47 
 
 
230 aa  63.9  0.000000002  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  normal  0.672792 
 
 
-
 
NC_014212  Mesil_0482  HAD-superfamily hydrolase, subfamily IA, variant 3  31.72 
 
 
213 aa  63.9  0.000000002  Meiothermus silvanus DSM 9946  Bacteria  normal  normal 
 
 
-
 
NC_007493  RSP_1279  CbbY family protein  29.69 
 
 
230 aa  63.5  0.000000003  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.183021  n/a   
 
 
-
 
NC_009049  Rsph17029_2938  HAD family hydrolase  29.69 
 
 
230 aa  63.5  0.000000003  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  normal 
 
 
-
 
NC_013421  Pecwa_1118  fructose-1-phosphatase  27.53 
 
 
188 aa  62.8  0.000000004  Pectobacterium wasabiae WPP163  Bacteria  decreased coverage  0.000766383  n/a   
 
 
-
 
NC_013947  Snas_3307  HAD-superfamily hydrolase subfamily IA, variant 3  30.56 
 
 
735 aa  62.4  0.000000005  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.081208  normal 
 
 
-
 
NC_010159  YpAngola_A0893  fructose-1-phosphatase  29.89 
 
 
188 aa  62.4  0.000000005  Yersinia pestis Angola  Bacteria  hitchhiker  0.000000160736  normal 
 
 
-
 
NC_009708  YpsIP31758_3236  fructose-1-phosphatase  29.89 
 
 
188 aa  62.4  0.000000005  Yersinia pseudotuberculosis IP 31758  Bacteria  hitchhiker  0.00000000000293158  n/a   
 
 
-
 
NC_010465  YPK_3371  fructose-1-phosphatase  29.89 
 
 
188 aa  62.4  0.000000005  Yersinia pseudotuberculosis YPIII  Bacteria  hitchhiker  0.0000166362  n/a   
 
 
-
 
NC_012793  GWCH70_1743  HAD-superfamily hydrolase, subfamily IA, variant 3  24.59 
 
 
227 aa  62.4  0.000000005  Geobacillus sp. WCH70  Bacteria  normal  0.293469  n/a   
 
 
-
 
NC_014213  Mesil_3262  hypothetical protein  29.95 
 
 
250 aa  62.4  0.000000006  Meiothermus silvanus DSM 9946  Bacteria  normal  normal  0.343145 
 
 
-
 
NC_011138  MADE_03683  putative enzymatic protein  29.02 
 
 
232 aa  62  0.000000006  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_2412  HAD-superfamily hydrolase, subfamily IA, variant 3  28.65 
 
 
222 aa  62.4  0.000000006  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_009784  VIBHAR_05389  phosphatase YqaB  29.02 
 
 
200 aa  62.4  0.000000006  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_008345  Sfri_3772  2-deoxyglucose-6-phosphatase  26.49 
 
 
218 aa  62.4  0.000000006  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_010505  Mrad2831_3556  HAD family hydrolase  30.96 
 
 
262 aa  62  0.000000006  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_008532  STER_0426  HAD family sugar phosphatase  26.76 
 
 
212 aa  62  0.000000007  Streptococcus thermophilus LMD-9  Bacteria  hitchhiker  0.0044369  n/a   
 
 
-
 
NC_007778  RPB_4341  HAD family hydrolase  33.33 
 
 
248 aa  62  0.000000008  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal  0.0493927 
 
 
-
 
NC_002947  PP_3112  hypothetical protein  36.08 
 
 
142 aa  60.8  0.00000001  Pseudomonas putida KT2440  Bacteria  normal  0.472591  normal  0.561703 
 
 
-
 
NC_012917  PC1_3209  fructose-1-phosphatase  27.53 
 
 
188 aa  61.2  0.00000001  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  unclonable  0.0000636798  n/a   
 
 
-
 
NC_013093  Amir_2212  HAD-superfamily hydrolase, subfamily IA, variant 3  31.67 
 
 
220 aa  60.5  0.00000002  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_007925  RPC_4133  HAD family hydrolase  30.36 
 
 
223 aa  60.5  0.00000002  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal 
 
 
-
 
NC_008009  Acid345_3787  HAD family hydrolase  26.98 
 
 
238 aa  60.8  0.00000002  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  0.85061  normal 
 
 
-
 
NC_008228  Patl_0794  beta-phosphoglucomutase family hydrolase  23.73 
 
 
197 aa  60.1  0.00000002  Pseudoalteromonas atlantica T6c  Bacteria  normal  0.0913327  n/a   
 
 
-
 
NC_011094  SeSA_A4061  6-phosphogluconate phosphatase  27.36 
 
 
221 aa  60.5  0.00000002  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  normal 
 
 
-
 
NC_011004  Rpal_4817  HAD-superfamily hydrolase, subfamily IA, variant 3  31.72 
 
 
235 aa  60.8  0.00000002  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.821962  n/a   
 
 
-
 
NC_013595  Sros_1428  putative phosphatase  35.54 
 
 
212 aa  60.5  0.00000002  Streptosporangium roseum DSM 43021  Bacteria  normal  0.307964  normal  0.0744833 
 
 
-
 
NC_011083  SeHA_C4183  6-phosphogluconate phosphatase  27.36 
 
 
221 aa  60.5  0.00000002  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  0.201399  normal 
 
 
-
 
NC_011004  Rpal_5014  HAD-superfamily hydrolase, subfamily IA, variant 3  34.48 
 
 
248 aa  59.7  0.00000003  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.652483  n/a   
 
 
-
 
NC_004347  SO_0431  2-deoxyglucose-6-phosphatase  27.41 
 
 
217 aa  59.7  0.00000003  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_011663  Sbal223_3849  2-deoxyglucose-6-phosphatase  25.51 
 
 
219 aa  60.1  0.00000003  Shewanella baltica OS223  Bacteria  normal  0.184484  hitchhiker  0.000000000456944 
 
 
-
 
NC_012791  Vapar_3029  HAD-superfamily hydrolase, subfamily IA, variant 3  29.27 
 
 
267 aa  59.7  0.00000003  Variovorax paradoxus S110  Bacteria  normal  0.0148713  n/a   
 
 
-
 
NC_011205  SeD_A4240  6-phosphogluconate phosphatase  27.36 
 
 
221 aa  60.1  0.00000003  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  0.0636361  normal 
 
 
-
 
NC_008599  CFF8240_0391  phosphoglycolate phosphatase  28.02 
 
 
216 aa  59.7  0.00000003  Campylobacter fetus subsp. fetus 82-40  Bacteria  normal  n/a   
 
 
-
 
NC_009438  Sputcn32_2065  beta-phosphoglucomutase family hydrolase  30.39 
 
 
201 aa  59.3  0.00000004  Shewanella putrefaciens CN-32  Bacteria  hitchhiker  0.000000166842  n/a   
 
 
-
 
NC_008639  Cpha266_2701  beta-phosphoglucomutase family hydrolase  25.84 
 
 
232 aa  59.7  0.00000004  Chlorobium phaeobacteroides DSM 266  Bacteria  normal  n/a   
 
 
-
 
NC_010803  Clim_0139  HAD-superfamily hydrolase, subfamily IA, variant 3  39.74 
 
 
220 aa  59.3  0.00000005  Chlorobium limicola DSM 245  Bacteria  hitchhiker  0.000437323  n/a   
 
 
-
 
NC_011080  SNSL254_A4133  6-phosphogluconate phosphatase  27.36 
 
 
221 aa  58.9  0.00000005  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  0.0258255  normal 
 
 
-
 
NC_013169  Ksed_13910  haloacid dehalogenase superfamily protein, subfamily IA, variant 3 with third motif having DD or ED  31.61 
 
 
232 aa  58.9  0.00000006  Kytococcus sedentarius DSM 20547  Bacteria  normal  0.491881  normal 
 
 
-
 
NC_010338  Caul_3346  HAD family hydrolase  26.26 
 
 
221 aa  58.9  0.00000006  Caulobacter sp. K31  Bacteria  normal  0.363754  normal 
 
 
-
 
NC_013947  Snas_4498  HAD-superfamily hydrolase subfamily IA, variant 3  32.22 
 
 
223 aa  58.5  0.00000007  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.511661  normal  0.0143777 
 
 
-
 
NC_007973  Rmet_1514  phosphoglycolate phosphatase  29.95 
 
 
243 aa  58.5  0.00000007  Cupriavidus metallidurans CH34  Bacteria  hitchhiker  0.00414525  decreased coverage  0.0000736152 
 
 
-
 
NC_008577  Shewana3_0432  2-deoxyglucose-6-phosphatase  28 
 
 
218 aa  58.5  0.00000007  Shewanella sp. ANA-3  Bacteria  unclonable  0.00000000498152  normal 
 
 
-
 
NC_002936  DET0395  glycoprotease family protein/hydrolase, beta-phosphoglucomutase family  24.19 
 
 
456 aa  58.5  0.00000008  Dehalococcoides ethenogenes 195  Bacteria  normal  n/a   
 
 
-
 
NC_013510  Tcur_2293  HAD-superfamily hydrolase, subfamily IA, variant 3  30.51 
 
 
218 aa  58.5  0.00000008  Thermomonospora curvata DSM 43183  Bacteria  hitchhiker  0.0000494788  n/a   
 
 
-
 
NC_009436  Ent638_4142  6-phosphogluconate phosphatase  27.59 
 
 
221 aa  58.2  0.00000009  Enterobacter sp. 638  Bacteria  normal  normal 
 
 
-
 
NC_008817  P9515_15581  phosphatase/phosphohexomutase  25.52 
 
 
225 aa  58.2  0.0000001  Prochlorococcus marinus str. MIT 9515  Bacteria  normal  n/a   
 
 
-
 
NC_007513  Syncc9902_1319  HAD family hydrolase  36.36 
 
 
219 aa  58.2  0.0000001  Synechococcus sp. CC9902  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_1791  putative haloacid dehalogenase/epoxide hydrolase  31.94 
 
 
218 aa  57.8  0.0000001  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_008148  Rxyl_2101  HAD family hydrolase  30.29 
 
 
231 aa  57.8  0.0000001  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
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