| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_3590 |
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| Symbol | |
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| ID | 1185255 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 4049295 |
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| End bp | 4049951 |
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| Gene Length | 657 bp |
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| Protein Length | 218 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637394942 |
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| Product | HAD-superfamily hydrolase |
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| Protein accession | NP_793369 |
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| Protein GI | 28870750 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0637] Predicted phosphatase/phosphohexomutase |
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| TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.906124 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCCCTTT CTGCGCTGTT GTTTGACCTG GACGGAACCC TCATCGACAC CGATGAACTG
CATTTGAACG CCTATAACCA GTTGCTGGCA CGCTGGGACC GGTCGACGGA TATCGAATAC
TACAAGGCCC ATGTGATGGG CTTTCCGGAC GACATGATTT TTGGCGGTCT GTTTCCCGAT
ATTCCCGCTT CGCAATACGC GGGTCTGGCT GCCGAGAAGG AAACGATGTT TCGCGCCCAG
CTGGGTGAGA CGATCCCTGT GGCAGGCGTG CTGCGCATTC TTGATCACGC ACAAAAAGCC
GGACTGCGCA CCGCAGTCGT CACCAATGCG CCGCGGGAAA ACGCGGTGGC CATGCTCACT
GGCCTGGGCA TCGTGGACCG TTTCGAGGCC ATCGTGATCG GCGGAGAACT GCAGCGCGGC
AAACCGCACC CCATACCCTA CCTCACGGCG CTGGAGCTGC TGGGCGTGAA GGCCGACCAG
GCCATTGCCT TCGAGGACTC GCTGGCCGGC GTGCAGTCAG CCCATGCGGC GGGCATCCAC
ACGTTTGGCG TGCTGTCGGG TTTGCAGGAA CATCAGCTTC GGCAGGCGGG TGCGCGTGAC
GTGATCCGTG ACTTCAATGC CGATGCCCTG TGGCAGTTTC TGCAAACGGC TGATTGA
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| Protein sequence | MALSALLFDL DGTLIDTDEL HLNAYNQLLA RWDRSTDIEY YKAHVMGFPD DMIFGGLFPD
IPASQYAGLA AEKETMFRAQ LGETIPVAGV LRILDHAQKA GLRTAVVTNA PRENAVAMLT
GLGIVDRFEA IVIGGELQRG KPHPIPYLTA LELLGVKADQ AIAFEDSLAG VQSAHAAGIH
TFGVLSGLQE HQLRQAGARD VIRDFNADAL WQFLQTAD
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