Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_1791 |
Symbol | |
ID | 5148933 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | - |
Start bp | 1859039 |
End bp | 1859695 |
Gene Length | 657 bp |
Protein Length | 218 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640556747 |
Product | putative haloacid dehalogenase/epoxide hydrolase |
Protein accession | YP_001237904 |
Protein GI | 148253319 |
COG category | [R] General function prediction only |
COG ID | [COG0637] Predicted phosphatase/phosphohexomutase |
TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 39 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGCTCGACA TGGACGGAAC ACTGCTCGAC ACCGAGCAGG TCTACCTCGA GGCATCGATC GCAGCGCTGA ATGCGCTCGG CTATCACGAC GGCGTTGTCG AGCTCTGTCA CGCGATGATC GGAATTCCCG GGCCTGACAA CGAGCGCACC TTGCGCGACC ATTTCGGCGA CAACTTTCCG CTCGTCGAAG TCAACCGCCT GTTTGCCGCC AAGACCGCCG AGATCCTGCA GGCCGGCATG CCGCTGAAGC GCGGCGTCAT CGATCTGCTC GATGCGATCG ACGCCGCCGG CCTGCCCAAG GCGGTCGTGA CCTCGTCGTC GCGCAACACG GCCGCCGAGC ATCTTCGCCT GGCCGGCATC GATCATCGGT TCGATGCGGT ATTGACCCGG GACGATGTCA GTCGCGCCAA GCCGCATCCG GATCTGTATC TGCTCGCCGC GCAACGCCTC GGCACGCGCG CGCCAGCCTG CGTGGCGATC GAGGATTCCA ATCCCGGCGT CGCTGCGGCG CATGCCGCGG GCGCAATCAC GCTGATGGTG CCGGACATCG TGCCGCCGAC TGATCGCTCC CGCGCGACAT GCGTGGCGGT GCTTCCGCAT CTCGACGCCG TCCGCGAACT GCTCGGAGAG CGGCTGCAGC TGGCATCGCC GACGTGA
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Protein sequence | MLDMDGTLLD TEQVYLEASI AALNALGYHD GVVELCHAMI GIPGPDNERT LRDHFGDNFP LVEVNRLFAA KTAEILQAGM PLKRGVIDLL DAIDAAGLPK AVVTSSSRNT AAEHLRLAGI DHRFDAVLTR DDVSRAKPHP DLYLLAAQRL GTRAPACVAI EDSNPGVAAA HAAGAITLMV PDIVPPTDRS RATCVAVLPH LDAVRELLGE RLQLASPT
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