Gene BBta_1791 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_1791 
Symbol 
ID5148933 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp1859039 
End bp1859695 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content66% 
IMG OID640556747 
Productputative haloacid dehalogenase/epoxide hydrolase 
Protein accessionYP_001237904 
Protein GI148253319 
COG category[R] General function prediction only 
COG ID[COG0637] Predicted phosphatase/phosphohexomutase 
TIGRFAM ID[TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCTCGACA TGGACGGAAC ACTGCTCGAC ACCGAGCAGG TCTACCTCGA GGCATCGATC 
GCAGCGCTGA ATGCGCTCGG CTATCACGAC GGCGTTGTCG AGCTCTGTCA CGCGATGATC
GGAATTCCCG GGCCTGACAA CGAGCGCACC TTGCGCGACC ATTTCGGCGA CAACTTTCCG
CTCGTCGAAG TCAACCGCCT GTTTGCCGCC AAGACCGCCG AGATCCTGCA GGCCGGCATG
CCGCTGAAGC GCGGCGTCAT CGATCTGCTC GATGCGATCG ACGCCGCCGG CCTGCCCAAG
GCGGTCGTGA CCTCGTCGTC GCGCAACACG GCCGCCGAGC ATCTTCGCCT GGCCGGCATC
GATCATCGGT TCGATGCGGT ATTGACCCGG GACGATGTCA GTCGCGCCAA GCCGCATCCG
GATCTGTATC TGCTCGCCGC GCAACGCCTC GGCACGCGCG CGCCAGCCTG CGTGGCGATC
GAGGATTCCA ATCCCGGCGT CGCTGCGGCG CATGCCGCGG GCGCAATCAC GCTGATGGTG
CCGGACATCG TGCCGCCGAC TGATCGCTCC CGCGCGACAT GCGTGGCGGT GCTTCCGCAT
CTCGACGCCG TCCGCGAACT GCTCGGAGAG CGGCTGCAGC TGGCATCGCC GACGTGA
 
Protein sequence
MLDMDGTLLD TEQVYLEASI AALNALGYHD GVVELCHAMI GIPGPDNERT LRDHFGDNFP 
LVEVNRLFAA KTAEILQAGM PLKRGVIDLL DAIDAAGLPK AVVTSSSRNT AAEHLRLAGI
DHRFDAVLTR DDVSRAKPHP DLYLLAAQRL GTRAPACVAI EDSNPGVAAA HAAGAITLMV
PDIVPPTDRS RATCVAVLPH LDAVRELLGE RLQLASPT