| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_3689 |
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| Symbol | |
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| ID | 5193733 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 4129274 |
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| End bp | 4131397 |
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| Gene Length | 2124 bp |
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| Protein Length | 707 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640588145 |
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| Product | HAD family hydrolase |
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| Protein accession | YP_001268997 |
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| Protein GI | 148548895 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0637] Predicted phosphatase/phosphohexomutase |
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| TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTTTTCT TTCACGGTAA ACAGATTTTC AGCGCCATCT TCGATATGGA TGGCACCCTC
TTCGACACCG AGCGCCTGCG CTTCAAGACA CTCAAGCAAG CGTCTCTGGA AATCTTCGGC
AAAGCGCTGA GCGAGCAGAC CTTGATTGGC TCGCTGGGCC TGAGCGCAAA AAAGGCCGAA
GCCCTTGCCA AGGCGCATAA CGGCGACGAC TTCCCGTACG CCGAAATCCG CCAACGCGCC
GATGAACTTG AGCTGGAGTA CGTGCGCAAT CACGGCGTAC CGATCAAGGC CGGCCTGCTG
GAGGTGCTGG AGCGCCTGCG CAAGTCGGGC CTGACCATGG CAGTGGCCAC CTCCAGCCGC
CGTGCCATCG CCGAGGAATA CCTGATCAAC GCCAACGTGC TGAAGTACTT CGACATCACC
GTTTGTGGCG ATGAAGTCGG CCAAGGCAAA CCCCACCCCG AGATTTTCCT GAAAGCCGCC
CGCGCGCTCA ATTGCGAGCC AGGCCAGTGC TTCATGGTCG AGGACTCGGA AAACGGCATG
CTGTCAGCGA TGCGCGCCGA AGGGCAGGCG ATCCTGATCG AGGACATCAA GCCGCCTGCG
CCGGAAATCA AGGCGGGCGC GCTCAAAGCC TACCGCAGCA TGCATGCGTT TCTCGCCGAC
CTGAGCGAGT GCGTACCCGA CCTGGGCATG CCTGCATTGA GCGAGCCGTT CCCGGCCTCG
ATGAACCAGT TCAGCGTGGG CATTCATGGT TTTGGCGCCA TCGGCGGCGG TTACCTGACG
CAGGTATTTT CCCATTGGGA CGGCTACACC CGACCGCGTG AAATCATTGC CGCAACCCGC
TCGCGCATGC TGCGCGAAAG CGTCAGCGCC TTCGGCCGCT ACAGCGTGCG CTACGGTGCC
ATATCGTTCG ACCAGACCAT CGACAACGTG CGCATGATCG ACATGGACGA TGACGACGCG
GTCATCAGCA TGTACACCAC TGCCGAAATC ATCGGCCTGA GCCTGCCCGA GCAGGCCATC
AGAAGCCAGG CCAGGGTGAT CGCCCAAGGC CTGCTGCAAC GCTTCGAGCG CCGAGGCCGC
GAGCTGACCC TGCTGATCGT GCTGAACAAG GTTGGCGGTG CGGCGTTCGT GCGGCGTCAT
GTGCAAGCCG AGCTGGCGTT ACTGTGCCCG CCTGCGATCA GCGAGCAGGT TTTGCAGAAG
ACCCATTTCG CCGAAACGGT GGTCAGCCGC ATCGTGTCCA AACTGGGCAA TGACGCGCTG
GTGCGGCAAC TGCGCATCAA GTCGCAGATG TTCCAGAACA GCCTGGAAGA CGAGCCCGCA
AGCACCTGCA AACCTTCAGC GCCGCTACCG GAGTACGAAC GGCTGATCGG CCACTTCAGG
CCCTTTGCAC AGCCCAGCAG CGCCATGAGC CAGCTGCATC TGGTGCTGTT CAACAGTGAA
GCCGACATGC CGCTTTACGC GGAGCGCGGC AGCGATCTGC TCGAACGCCT GCGCCAGGTG
AAGACAGTGC CAGACATTGC CCAGATCCAG ATCATCAAGA ACCGCCTGTG GAACGGCCCG
CACGCCATCG TGGCCTGGTA CGCCAGCCTG CTGGGCCATG CCTGGGTCGG CCAGGGCATG
GGCGATGCGC GGGTGAGTGA GTTGGCCGAG CGCCTGATTC GCCAGGAGGT CGCGCCTGCA
CTGGTGGCCG AATACCCACA GATGGCCGAG GTGGTCAGCC GCTTTGCCGA GGCATTCCTC
GAGCGCTGCA AAACCTCGTT CAAAGACCCC TGCGCCCGGG TAGGCCGCGA CCCCTTGCGC
AAGCTGCAAC GCAACGAACG CATCCTCAGC AGCATCGACC TTGCCCGCAA GCACGGTATT
GCAACCCCGG CCCTGGCGTT TGGCGCCGGG CTCGCCATTC ACCACGCCCT GAACTGCAGC
AACAGCAAGG ACCTGGAAAG CCAGGCAATC AGGCAGGTTT ACCTGGATAA CCAGGAAAGC
GTCGAAGCCG TGCTCACCCA TGCCAACAAA CCGTTCCCCG GGTTGTGCCC CGTCAAGGAC
GCGGAACTGA TCGCTGCCAT CCGTGAAGGC TTCCGCCAAT TGCCACAGCC AGCTTCGCGC
CACGCGGTTG CTGTAGGCTC ATAA
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| Protein sequence | MLFFHGKQIF SAIFDMDGTL FDTERLRFKT LKQASLEIFG KALSEQTLIG SLGLSAKKAE
ALAKAHNGDD FPYAEIRQRA DELELEYVRN HGVPIKAGLL EVLERLRKSG LTMAVATSSR
RAIAEEYLIN ANVLKYFDIT VCGDEVGQGK PHPEIFLKAA RALNCEPGQC FMVEDSENGM
LSAMRAEGQA ILIEDIKPPA PEIKAGALKA YRSMHAFLAD LSECVPDLGM PALSEPFPAS
MNQFSVGIHG FGAIGGGYLT QVFSHWDGYT RPREIIAATR SRMLRESVSA FGRYSVRYGA
ISFDQTIDNV RMIDMDDDDA VISMYTTAEI IGLSLPEQAI RSQARVIAQG LLQRFERRGR
ELTLLIVLNK VGGAAFVRRH VQAELALLCP PAISEQVLQK THFAETVVSR IVSKLGNDAL
VRQLRIKSQM FQNSLEDEPA STCKPSAPLP EYERLIGHFR PFAQPSSAMS QLHLVLFNSE
ADMPLYAERG SDLLERLRQV KTVPDIAQIQ IIKNRLWNGP HAIVAWYASL LGHAWVGQGM
GDARVSELAE RLIRQEVAPA LVAEYPQMAE VVSRFAEAFL ERCKTSFKDP CARVGRDPLR
KLQRNERILS SIDLARKHGI ATPALAFGAG LAIHHALNCS NSKDLESQAI RQVYLDNQES
VEAVLTHANK PFPGLCPVKD AELIAAIREG FRQLPQPASR HAVAVGS
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