More than 300 homologs were found in PanDaTox collection
for query gene PputW619_2424 on replicon NC_010501
Organism: Pseudomonas putida W619



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010501  PputW619_2424  HAD family hydrolase  100 
 
 
221 aa  443  1.0000000000000001e-124  Pseudomonas putida W619  Bacteria  normal  normal 
 
 
-
 
NC_010322  PputGB1_2742  HAD family hydrolase  84.86 
 
 
218 aa  373  1e-102  Pseudomonas putida GB-1  Bacteria  normal  normal 
 
 
-
 
NC_009512  Pput_2602  HAD family hydrolase  84.79 
 
 
227 aa  366  1e-100  Pseudomonas putida F1  Bacteria  normal  normal  0.852152 
 
 
-
 
NC_002947  PP_3112  hypothetical protein  84.44 
 
 
142 aa  227  1e-58  Pseudomonas putida KT2440  Bacteria  normal  0.472591  normal  0.561703 
 
 
-
 
NC_011729  PCC7424_4434  HAD-superfamily hydrolase, subfamily IA, variant 3  48.37 
 
 
217 aa  211  7.999999999999999e-54  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
NC_007952  Bxe_B1761  HAD family hydrolase  46.92 
 
 
230 aa  189  2.9999999999999997e-47  Burkholderia xenovorans LB400  Bacteria  normal  0.0120798  normal  0.0416472 
 
 
-
 
NC_010338  Caul_0320  HAD family hydrolase  47.39 
 
 
241 aa  186  3e-46  Caulobacter sp. K31  Bacteria  normal  0.288784  normal 
 
 
-
 
NC_008312  Tery_2465  HAD family hydrolase  42.47 
 
 
220 aa  182  3e-45  Trichodesmium erythraeum IMS101  Bacteria  normal  normal 
 
 
-
 
NC_004578  PSPTO_3590  HAD-superfamily hydrolase  46.51 
 
 
218 aa  182  5.0000000000000004e-45  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.906124  n/a   
 
 
-
 
NC_007650  BTH_II0272  HAD-superfamily hydrolase  48.11 
 
 
221 aa  179  2e-44  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_007413  Ava_4630  HAD family hydrolase  40.09 
 
 
225 aa  179  4e-44  Anabaena variabilis ATCC 29413  Bacteria  normal  hitchhiker  0.00554039 
 
 
-
 
NC_014248  Aazo_4442  HAD superfamily hydrolase  41.01 
 
 
228 aa  176  3e-43  'Nostoc azollae' 0708  Bacteria  normal  0.536318  n/a   
 
 
-
 
NC_009075  BURPS668_A2948  HAD-superfamily hydrolase  47.64 
 
 
221 aa  174  7e-43  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_014212  Mesil_0482  HAD-superfamily hydrolase, subfamily IA, variant 3  49.07 
 
 
213 aa  171  1e-41  Meiothermus silvanus DSM 9946  Bacteria  normal  normal 
 
 
-
 
NC_013946  Mrub_0251  HAD-superfamily hydrolase subfamily IA, variant 3  43.52 
 
 
216 aa  162  3e-39  Meiothermus ruber DSM 1279  Bacteria  normal  normal  0.822561 
 
 
-
 
NC_009485  BBta_7216  putative haloacid dehalogenase-like hydrolase  43.06 
 
 
223 aa  160  1e-38  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_012917  PC1_3475  HAD-superfamily hydrolase, subfamily IA, variant 3  41.94 
 
 
221 aa  156  3e-37  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_008312  Tery_0409  HAD family hydrolase  35.75 
 
 
228 aa  156  3e-37  Trichodesmium erythraeum IMS101  Bacteria  normal  normal 
 
 
-
 
NC_009952  Dshi_1676  HAD-like hydrolase  47.3 
 
 
219 aa  155  6e-37  Dinoroseobacter shibae DFL 12  Bacteria  normal  0.653252  normal  0.340852 
 
 
-
 
NC_008148  Rxyl_2101  HAD family hydrolase  45.24 
 
 
231 aa  145  7.0000000000000006e-34  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_009355  OSTLU_40332  predicted protein  44.34 
 
 
247 aa  135  4e-31  Ostreococcus lucimarinus CCE9901  Eukaryota  normal  n/a   
 
 
-
 
NC_013730  Slin_0811  HAD-superfamily hydrolase, subfamily IA, variant 3  37.25 
 
 
225 aa  129  5.0000000000000004e-29  Spirosoma linguale DSM 74  Bacteria  normal  normal  0.332678 
 
 
-
 
NC_011884  Cyan7425_3373  HAD-superfamily hydrolase, subfamily IA, variant 3  36.02 
 
 
231 aa  119  4.9999999999999996e-26  Cyanothece sp. PCC 7425  Bacteria  normal  0.154909  normal  0.78527 
 
 
-
 
NC_013730  Slin_0267  HAD-superfamily hydrolase, subfamily IA, variant 3  35.03 
 
 
220 aa  116  3e-25  Spirosoma linguale DSM 74  Bacteria  normal  0.583067  normal  0.103324 
 
 
-
 
NC_013037  Dfer_2943  HAD-superfamily hydrolase, subfamily IA, variant 3  32.04 
 
 
218 aa  114  1.0000000000000001e-24  Dyadobacter fermentans DSM 18053  Bacteria  normal  0.86932  normal 
 
 
-
 
NC_013730  Slin_0136  HAD-superfamily hydrolase, subfamily IA, variant 3  31.96 
 
 
225 aa  108  9.000000000000001e-23  Spirosoma linguale DSM 74  Bacteria  normal  normal 
 
 
-
 
NC_013061  Phep_3134  HAD-superfamily hydrolase, subfamily IA, variant 3  31.25 
 
 
219 aa  107  1e-22  Pedobacter heparinus DSM 2366  Bacteria  normal  0.833655  normal 
 
 
-
 
NC_009441  Fjoh_1356  HAD family hydrolase  28.11 
 
 
221 aa  107  2e-22  Flavobacterium johnsoniae UW101  Bacteria  normal  0.14421  n/a   
 
 
-
 
NC_009767  Rcas_0853  HAD family hydrolase  34.62 
 
 
221 aa  101  7e-21  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal  0.0114666 
 
 
-
 
NC_002936  DET0395  glycoprotease family protein/hydrolase, beta-phosphoglucomutase family  29.85 
 
 
456 aa  97.8  1e-19  Dehalococcoides ethenogenes 195  Bacteria  normal  n/a   
 
 
-
 
NC_012034  Athe_0397  beta-phosphoglucomutase family hydrolase  27.4 
 
 
223 aa  97.8  1e-19  Anaerocellum thermophilum DSM 6725  Bacteria  normal  n/a   
 
 
-
 
NC_009455  DehaBAV1_0374  HAD family hydrolase  31.34 
 
 
456 aa  97.1  2e-19  Dehalococcoides sp. BAV1  Bacteria  hitchhiker  0.0000852801  n/a   
 
 
-
 
NC_009523  RoseRS_0332  HAD family hydrolase  33.66 
 
 
232 aa  97.1  2e-19  Roseiflexus sp. RS-1  Bacteria  normal  0.827004  normal  0.0405623 
 
 
-
 
NC_007512  Plut_2091  Beta-phosphoglucomutase hydrolase  32.2 
 
 
233 aa  96.3  3e-19  Chlorobium luteolum DSM 273  Bacteria  normal  normal 
 
 
-
 
NC_008025  Dgeo_1893  HAD family hydrolase  36.15 
 
 
222 aa  95.9  4e-19  Deinococcus geothermalis DSM 11300  Bacteria  normal  normal  0.675301 
 
 
-
 
NC_013552  DhcVS_338  hypothetical protein  29.85 
 
 
456 aa  94.4  1e-18  Dehalococcoides sp. VS  Bacteria  hitchhiker  0.00693249  n/a   
 
 
-
 
NC_002939  GSU1839  HAD superfamily hydrolase  33.18 
 
 
228 aa  93.6  2e-18  Geobacter sulfurreducens PCA  Bacteria  normal  0.605398  n/a   
 
 
-
 
NC_003909  BCE_4276  HAD superfamily hydrolase  29.41 
 
 
220 aa  92.4  4e-18  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_005945  BAS4107  HAD superfamily hydrolase  28.31 
 
 
221 aa  92.8  4e-18  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_4427  HAD superfamily hydrolase  28.31 
 
 
221 aa  92.8  4e-18  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_013946  Mrub_2205  HAD-superfamily hydrolase subfamily IA, variant 3  32 
 
 
228 aa  92.4  5e-18  Meiothermus ruber DSM 1279  Bacteria  normal  0.322675  normal 
 
 
-
 
NC_005957  BT9727_3945  HAD superfamily hydrolase  27.85 
 
 
221 aa  91.3  1e-17  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_007517  Gmet_1348  HAD family hydrolase  31.8 
 
 
226 aa  90.5  2e-17  Geobacter metallireducens GS-15  Bacteria  normal  0.523514  hitchhiker  0.0000000193697 
 
 
-
 
NC_011772  BCG9842_B0922  hydrolase, haloacid dehalogenase-like family  27.56 
 
 
235 aa  90.5  2e-17  Bacillus cereus G9842  Bacteria  normal  normal 
 
 
-
 
NC_006274  BCZK3956  HAD superfamily hydrolase  27.52 
 
 
220 aa  89.7  3e-17  Bacillus cereus E33L  Bacteria  normal  0.945579  n/a   
 
 
-
 
NC_011725  BCB4264_A4313  hydrolase, haloacid dehalogenase-like family  27.56 
 
 
235 aa  89  5e-17  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_011773  BCAH820_4222  hydrolase, haloacid dehalogenase-like family  27.52 
 
 
220 aa  89  5e-17  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_009483  Gura_2233  HAD family hydrolase  31.16 
 
 
225 aa  87.8  1e-16  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_013522  Taci_1058  HAD-superfamily hydrolase, subfamily IA, variant 3  31.96 
 
 
217 aa  87.8  1e-16  Thermanaerovibrio acidaminovorans DSM 6589  Bacteria  normal  0.918987  n/a   
 
 
-
 
NC_008639  Cpha266_2701  beta-phosphoglucomutase family hydrolase  29.76 
 
 
232 aa  87.8  1e-16  Chlorobium phaeobacteroides DSM 266  Bacteria  normal  n/a   
 
 
-
 
NC_009012  Cthe_3073  HAD family hydrolase  29.35 
 
 
223 aa  87.4  2e-16  Clostridium thermocellum ATCC 27405  Bacteria  hitchhiker  0.00582956  n/a   
 
 
-
 
NC_010814  Glov_1614  HAD-superfamily hydrolase, subfamily IA, variant 3  27.54 
 
 
224 aa  87.4  2e-16  Geobacter lovleyi SZ  Bacteria  normal  0.0147527  n/a   
 
 
-
 
NC_009486  Tpet_1517  HAD family hydrolase  29.41 
 
 
216 aa  86.3  4e-16  Thermotoga petrophila RKU-1  Bacteria  normal  n/a   
 
 
-
 
NC_010483  TRQ2_1566  HAD family hydrolase  29.41 
 
 
216 aa  86.3  4e-16  Thermotoga sp. RQ2  Bacteria  normal  n/a   
 
 
-
 
NC_008340  Mlg_0810  HAD family hydrolase  35.37 
 
 
241 aa  86.3  4e-16  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.731901  normal  0.645331 
 
 
-
 
NC_010831  Cphamn1_2486  beta-phosphoglucomutase family hydrolase  27.32 
 
 
232 aa  85.5  6e-16  Chlorobium phaeobacteroides BS1  Bacteria  normal  0.24904  normal 
 
 
-
 
NC_010803  Clim_0139  HAD-superfamily hydrolase, subfamily IA, variant 3  31.61 
 
 
220 aa  84.7  9e-16  Chlorobium limicola DSM 245  Bacteria  hitchhiker  0.000437323  n/a   
 
 
-
 
NC_013595  Sros_5916  HAD family hydrolase  32.04 
 
 
218 aa  84.3  0.000000000000001  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0345843  normal  0.0351614 
 
 
-
 
NC_010184  BcerKBAB4_4056  HAD family hydrolase  27.6 
 
 
215 aa  84.3  0.000000000000001  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_013132  Cpin_3992  HAD-superfamily hydrolase, subfamily IA, variant 3  28.79 
 
 
218 aa  84  0.000000000000002  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.177922  normal  0.23268 
 
 
-
 
NC_010803  Clim_2483  beta-phosphoglucomutase family hydrolase  28.16 
 
 
233 aa  84  0.000000000000002  Chlorobium limicola DSM 245  Bacteria  normal  0.0678579  n/a   
 
 
-
 
NC_013517  Sterm_2682  HAD-superfamily hydrolase, subfamily IA, variant 3  26.15 
 
 
226 aa  84  0.000000000000002  Sebaldella termitidis ATCC 33386  Bacteria  normal  n/a   
 
 
-
 
NC_011060  Ppha_2878  beta-phosphoglucomutase family hydrolase  28.78 
 
 
233 aa  84  0.000000000000002  Pelodictyon phaeoclathratiforme BU-1  Bacteria  normal  n/a   
 
 
-
 
NC_011899  Hore_10160  HAD-superfamily hydrolase, subfamily IA, variant 3  25.36 
 
 
217 aa  83.2  0.000000000000003  Halothermothrix orenii H 168  Bacteria  normal  0.64096  n/a   
 
 
-
 
NC_011884  Cyan7425_1738  HAD-superfamily hydrolase, subfamily IA, variant 3  31.44 
 
 
235 aa  82.8  0.000000000000004  Cyanothece sp. PCC 7425  Bacteria  normal  0.324615  normal  0.173582 
 
 
-
 
NC_008009  Acid345_3787  HAD family hydrolase  32.64 
 
 
238 aa  82.4  0.000000000000005  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  0.85061  normal 
 
 
-
 
NC_008528  OEOE_0319  HAD family sugar phosphatase  30 
 
 
223 aa  82.4  0.000000000000005  Oenococcus oeni PSU-1  Bacteria  normal  n/a   
 
 
-
 
NC_010320  Teth514_2198  beta-phosphoglucomutase  26.13 
 
 
215 aa  82  0.000000000000006  Thermoanaerobacter sp. X514  Bacteria  normal  0.102511  n/a   
 
 
-
 
NC_013521  Sked_02150  haloacid dehalogenase superfamily protein, subfamily IA, variant 3 with third motif having DD or ED/beta-phosphoglucomutase family hydrolase  36.17 
 
 
246 aa  82  0.000000000000007  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_014148  Plim_3898  HAD-superfamily hydrolase, subfamily IA, variant 3  31.48 
 
 
233 aa  80.9  0.00000000000001  Planctomyces limnophilus DSM 3776  Bacteria  normal  n/a   
 
 
-
 
NC_007925  RPC_0467  HAD family hydrolase  32.23 
 
 
219 aa  81.3  0.00000000000001  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.577769 
 
 
-
 
NC_012793  GWCH70_1743  HAD-superfamily hydrolase, subfamily IA, variant 3  27.98 
 
 
227 aa  81.3  0.00000000000001  Geobacillus sp. WCH70  Bacteria  normal  0.293469  n/a   
 
 
-
 
NC_014212  Mesil_0179  HAD-superfamily hydrolase, subfamily IA, variant 3  29.44 
 
 
218 aa  80.5  0.00000000000002  Meiothermus silvanus DSM 9946  Bacteria  normal  normal 
 
 
-
 
NC_007514  Cag_0071  Beta-phosphoglucomutase hydrolase  27.98 
 
 
234 aa  80.5  0.00000000000002  Chlorobium chlorochromatii CaD3  Bacteria  normal  n/a   
 
 
-
 
NC_009441  Fjoh_2777  HAD family hydrolase  25.35 
 
 
220 aa  80.1  0.00000000000002  Flavobacterium johnsoniae UW101  Bacteria  normal  0.0810098  n/a   
 
 
-
 
NC_008609  Ppro_1749  HAD family hydrolase  27.32 
 
 
227 aa  80.5  0.00000000000002  Pelobacter propionicus DSM 2379  Bacteria  normal  0.109928  n/a   
 
 
-
 
NC_008789  Hhal_1452  HAD family hydrolase  33.94 
 
 
241 aa  80.1  0.00000000000002  Halorhodospira halophila SL1  Bacteria  normal  n/a   
 
 
-
 
NC_013421  Pecwa_0767  beta-phosphoglucomutase  27.78 
 
 
220 aa  79.3  0.00000000000004  Pectobacterium wasabiae WPP163  Bacteria  normal  0.180027  n/a   
 
 
-
 
NC_009077  Mjls_1199  beta-phosphoglucomutase family hydrolase  31.8 
 
 
263 aa  79  0.00000000000005  Mycobacterium sp. JLS  Bacteria  normal  normal  0.0392368 
 
 
-
 
NC_012791  Vapar_3792  HAD-superfamily hydrolase, subfamily IA, variant 3  26.7 
 
 
229 aa  79  0.00000000000006  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_007333  Tfu_2488  HAD family hydrolase  31.19 
 
 
237 aa  79  0.00000000000006  Thermobifida fusca YX  Bacteria  normal  0.271509  n/a   
 
 
-
 
NC_013517  Sterm_2267  HAD-superfamily hydrolase, subfamily IA, variant 3  28.06 
 
 
219 aa  78.6  0.00000000000006  Sebaldella termitidis ATCC 33386  Bacteria  normal  n/a   
 
 
-
 
NC_013132  Cpin_5088  beta-phosphoglucomutase  29.17 
 
 
219 aa  79  0.00000000000006  Chitinophaga pinensis DSM 2588  Bacteria  decreased coverage  0.00016924  normal  0.408522 
 
 
-
 
NC_008783  BARBAKC583_0412  HAD family hydrolase  27.03 
 
 
230 aa  78.6  0.00000000000006  Bartonella bacilliformis KC583  Bacteria  normal  0.983661  n/a   
 
 
-
 
NC_011059  Paes_2237  beta-phosphoglucomutase family hydrolase  28.29 
 
 
254 aa  78.2  0.00000000000008  Prosthecochloris aestuarii DSM 271  Bacteria  normal  0.202357  normal 
 
 
-
 
NC_008146  Mmcs_1172  Beta-phosphoglucomutase hydrolase  31.8 
 
 
263 aa  78.6  0.00000000000008  Mycobacterium sp. MCS  Bacteria  normal  0.207951  n/a   
 
 
-
 
NC_008705  Mkms_1189  beta-phosphoglucomutase family hydrolase  31.8 
 
 
263 aa  78.6  0.00000000000008  Mycobacterium sp. KMS  Bacteria  normal  0.832835  normal 
 
 
-
 
NC_010505  Mrad2831_3556  HAD family hydrolase  30.17 
 
 
262 aa  77.4  0.0000000000001  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_013457  VEA_000391  2-deoxyglucose-6-phosphate hydrolase YniC  27.89 
 
 
218 aa  76.6  0.0000000000002  Vibrio sp. Ex25  Bacteria  normal  0.0106831  n/a   
 
 
-
 
NC_006369  lpl1096  hypothetical protein  26.73 
 
 
222 aa  77  0.0000000000002  Legionella pneumophila str. Lens  Bacteria  n/a    n/a   
 
 
-
 
NC_011071  Smal_0452  HAD-superfamily hydrolase, subfamily IA, variant 3  33.17 
 
 
227 aa  77  0.0000000000002  Stenotrophomonas maltophilia R551-3  Bacteria  normal  normal 
 
 
-
 
NC_011146  Gbem_3082  HAD-superfamily hydrolase, subfamily IA, variant 3  28.44 
 
 
224 aa  77.4  0.0000000000002  Geobacter bemidjiensis Bem  Bacteria  normal  0.48861  n/a   
 
 
-
 
NC_012918  GM21_1179  HAD-superfamily hydrolase, subfamily IA, variant 3  28.71 
 
 
224 aa  77.4  0.0000000000002  Geobacter sp. M21  Bacteria  n/a    hitchhiker  2.0108500000000004e-18 
 
 
-
 
NC_010084  Bmul_0864  HAD family hydrolase  31.72 
 
 
226 aa  77  0.0000000000002  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal 
 
 
-
 
NC_008530  LGAS_0217  HAD family sugar phosphatase  30.65 
 
 
220 aa  77.4  0.0000000000002  Lactobacillus gasseri ATCC 33323  Bacteria  hitchhiker  0.000000425935  hitchhiker  0.000000624715 
 
 
-
 
NC_009436  Ent638_2157  beta-phosphoglucomutase  29.38 
 
 
585 aa  76.3  0.0000000000003  Enterobacter sp. 638  Bacteria  normal  normal 
 
 
-
 
NC_007413  Ava_0109  HAD family hydrolase  29.33 
 
 
223 aa  76.6  0.0000000000003  Anabaena variabilis ATCC 29413  Bacteria  normal  decreased coverage  0.00453013 
 
 
-
 
NC_008527  LACR_0484  HAD family sugar phosphatase  28.65 
 
 
221 aa  76.6  0.0000000000003  Lactococcus lactis subsp. cremoris SK11  Bacteria  normal  n/a   
 
 
-
 
NC_013235  Namu_2787  HAD-superfamily hydrolase, subfamily IA, variant 3  34.76 
 
 
230 aa  75.9  0.0000000000004  Nakamurella multipartita DSM 44233  Bacteria  hitchhiker  0.00137861  hitchhiker  0.0000132599 
 
 
-
 
NC_007947  Mfla_1543  HAD family hydrolase  29.17 
 
 
218 aa  76.3  0.0000000000004  Methylobacillus flagellatus KT  Bacteria  normal  normal  0.290377 
 
 
-
 
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