Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MADE_03683 |
Symbol | |
ID | 6777626 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alteromonas macleodii 'Deep ecotype' |
Kingdom | Bacteria |
Replicon accession | NC_011138 |
Strand | - |
Start bp | 3973533 |
End bp | 3974231 |
Gene Length | 699 bp |
Protein Length | 232 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 642757136 |
Product | putative enzymatic protein |
Protein accession | YP_002127969 |
Protein GI | 196158480 |
COG category | [R] General function prediction only |
COG ID | [COG0637] Predicted phosphatase/phosphohexomutase |
TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | TTGCATTTTG CGTCTTCAAC TTCAGGCCAA TTAGCAGTTA GCGAAAAAAC CACAACGCTA TTGTTTGACC ACGACGGTAC GTTAATCGAC TCAGAAACCG TACATTACGT TTTATGGAAA GCCATACTGC TTGGATATCA TGTTGAGTTA AGTGAAACAT TTTATTGTGA GGTGATGGCA GGCATTCCCG TTAAGCAAAA CGCCATCGAT TTGGTAGCGC ATTTTAAATT AGACGTAGCG CCTGAGGTTT TAGCCGAACA GAAACACAAA AGTATTAGCG ACTATTTAGA TAAACACGCT TTTCCTCTCA TGCCTTATGC TAAAGAGACC ATAAAGACAT GCTTCGATAA AGGCTACCGC ATTGGTATTG TTACAGGCGG AAGTAAAAAG TCGGTGGAAA AAACCTTATC TCAGTATGCT TTGGCAAACT ACATATCTTG TGTGGTGGCC GTAGAGGATG TGGTAACAAG CAAACCCGCT CCAGATTGTT ACGAACTTGC CATGCGACAA CTCAACAAAA CCCCTGAAGA ATGCGTGGCC ATTGAAGATA CTCAAACTGG GATGAGGGCC GCCCTTGCCG CTAACTTAGC CTGTGTGGTG ATCCCCACGC CGCTATCGCA GCACCATGAC TTATCTCGAG CAACCGTGCG CTGCGGCAAC CTTCAAACGT GGGTGGAAAG CGAACTTATT TCGCAATAA
|
Protein sequence | MHFASSTSGQ LAVSEKTTTL LFDHDGTLID SETVHYVLWK AILLGYHVEL SETFYCEVMA GIPVKQNAID LVAHFKLDVA PEVLAEQKHK SISDYLDKHA FPLMPYAKET IKTCFDKGYR IGIVTGGSKK SVEKTLSQYA LANYISCVVA VEDVVTSKPA PDCYELAMRQ LNKTPEECVA IEDTQTGMRA ALAANLACVV IPTPLSQHHD LSRATVRCGN LQTWVESELI SQ
|
| |