Gene MADE_03683 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMADE_03683 
Symbol 
ID6777626 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlteromonas macleodii 'Deep ecotype' 
KingdomBacteria 
Replicon accessionNC_011138 
Strand
Start bp3973533 
End bp3974231 
Gene Length699 bp 
Protein Length232 aa 
Translation table11 
GC content45% 
IMG OID642757136 
Productputative enzymatic protein 
Protein accessionYP_002127969 
Protein GI196158480 
COG category[R] General function prediction only 
COG ID[COG0637] Predicted phosphatase/phosphohexomutase 
TIGRFAM ID[TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGCATTTTG CGTCTTCAAC TTCAGGCCAA TTAGCAGTTA GCGAAAAAAC CACAACGCTA 
TTGTTTGACC ACGACGGTAC GTTAATCGAC TCAGAAACCG TACATTACGT TTTATGGAAA
GCCATACTGC TTGGATATCA TGTTGAGTTA AGTGAAACAT TTTATTGTGA GGTGATGGCA
GGCATTCCCG TTAAGCAAAA CGCCATCGAT TTGGTAGCGC ATTTTAAATT AGACGTAGCG
CCTGAGGTTT TAGCCGAACA GAAACACAAA AGTATTAGCG ACTATTTAGA TAAACACGCT
TTTCCTCTCA TGCCTTATGC TAAAGAGACC ATAAAGACAT GCTTCGATAA AGGCTACCGC
ATTGGTATTG TTACAGGCGG AAGTAAAAAG TCGGTGGAAA AAACCTTATC TCAGTATGCT
TTGGCAAACT ACATATCTTG TGTGGTGGCC GTAGAGGATG TGGTAACAAG CAAACCCGCT
CCAGATTGTT ACGAACTTGC CATGCGACAA CTCAACAAAA CCCCTGAAGA ATGCGTGGCC
ATTGAAGATA CTCAAACTGG GATGAGGGCC GCCCTTGCCG CTAACTTAGC CTGTGTGGTG
ATCCCCACGC CGCTATCGCA GCACCATGAC TTATCTCGAG CAACCGTGCG CTGCGGCAAC
CTTCAAACGT GGGTGGAAAG CGAACTTATT TCGCAATAA
 
Protein sequence
MHFASSTSGQ LAVSEKTTTL LFDHDGTLID SETVHYVLWK AILLGYHVEL SETFYCEVMA 
GIPVKQNAID LVAHFKLDVA PEVLAEQKHK SISDYLDKHA FPLMPYAKET IKTCFDKGYR
IGIVTGGSKK SVEKTLSQYA LANYISCVVA VEDVVTSKPA PDCYELAMRQ LNKTPEECVA
IEDTQTGMRA ALAANLACVV IPTPLSQHHD LSRATVRCGN LQTWVESELI SQ