| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_3482 |
|---|
| Symbol | |
|---|
| ID | 3566942 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dechloromonas aromatica RCB |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007298 |
|---|
| Strand | - |
|---|
| Start bp | 3731105 |
|---|
| End bp | 3731785 |
|---|
| Gene Length | 681 bp |
|---|
| Protein Length | 226 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 637681954 |
|---|
| Product | phosphoglycolate phosphatase |
|---|
| Protein accession | YP_286681 |
|---|
| Protein GI | 71909094 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0546] Predicted phosphatases |
|---|
| TIGRFAM ID | [TIGR01449] 2-phosphoglycolate phosphatase, prokaryotic
[TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 58 |
|---|
| Plasmid unclonability p-value | 0.824519 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.190106 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCACTTCG AATCCGTCAC CTTCGATCTC GACGGTACGC TGCTCGATAC CATTGCCGAT
CTGGCCGAGG CCTGTCGCCT GATGCTCGAT GAAATCGGCG CCCCGCCTCG CACGCCGGCG
GAAGTACACA GCTTTGTCGG CAAGGGCATG GCGGTGCTGG TTGAGCGTTG TTTGACGCAC
GAGCATCCGC CGAGTGCCGA ACAGTTGCAC TTCGCCATTG AATCCTTCAA GCGGCACTAT
GCGGTGGTCA ACGGGAAATA TACCCAGATT TATCCGGGCG TGATCGAAGG CCTGCAAGCC
TGGAAAGCCA GCGGCCTCAA AATGGGGGTT GTCACCAACA AACCGGGCAT GTTCACCGAA
GCCTTGCTTG ATCGCATGGG CATGACCGAT TACTTTGACG TGATCGTTTC CGGTGATACG
ACACCGAACA AGAAGCCGCA CCCGGAGCCC ATCCTGCACG CTTGCCGCCT GTTCAATGTG
CGGCCGGATC GAAACCTGCA CATCGGCGAT TCCGAAAACG ACATTCACGC CGCCCGCGCT
GCCGGTTCGC CTACCTTCTG CGTGCCCTAT GGCTACAACG AAGGCAAGCC GGTGGACAGT
GCCGATTGCG ATGCGCTAGT ATCAGACCTG CTTGCTGGCT ATCAGCAGGC GCTCATTTTC
AAAGACCTCA TACACAAATG A
|
|---|
| Protein sequence | MHFESVTFDL DGTLLDTIAD LAEACRLMLD EIGAPPRTPA EVHSFVGKGM AVLVERCLTH
EHPPSAEQLH FAIESFKRHY AVVNGKYTQI YPGVIEGLQA WKASGLKMGV VTNKPGMFTE
ALLDRMGMTD YFDVIVSGDT TPNKKPHPEP ILHACRLFNV RPDRNLHIGD SENDIHAARA
AGSPTFCVPY GYNEGKPVDS ADCDALVSDL LAGYQQALIF KDLIHK
|
|---|
| |