Gene Syncc9902_1319 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9902_1319 
Symbol 
ID3743221 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9902 
KingdomBacteria 
Replicon accessionNC_007513 
Strand
Start bp1276474 
End bp1277133 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content56% 
IMG OID637771502 
ProductHAD family hydrolase 
Protein accessionYP_377327 
Protein GI78184892 
COG category[R] General function prediction only 
COG ID[COG0637] Predicted phosphatase/phosphohexomutase 
TIGRFAM ID[TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGCATC CACCGGTGGC CTGTTTGTTT GATTTGGATG GGCTCCTGCT CGACACGGAG 
CCGTTCCATG GGATGGGCTG GCGTCAGGCC GCGGCCCAAT TCGGTGGCGA ACTGAGCGAC
GAACAATTAC TGCAGCTCAG AGGGCGTCGA CGCAGGGACT GCGCTCAGCA AGTGGACGAT
TGGCTTCCAA CCCCAATTGG AATTGACACT CTGCTGGCGG TTCAACAACC AATTGTTCGA
GCATTGCTCC CACAGGCCCC CGCGATGCCG GGGGCAGAAG GGTTGGTGCA GCACTGCTGC
GATCACGGCA TCAAAACAGC GCTCGTCACC AGCAGCAGTC GTGAGGCGGT GGCCTTTAAA
ACCAGCCACC ACCCTTGGGT TGAATCGATC AAAGAACGCA TTTATGGCGA TGATCCGCAG
TTGGCAGCCG GAAAACCAGA TCCAGCGCCG TATTTGCTGG CGGCCAAACG ACTCAATGTG
AATCCAAGCG AATGCTGGGC CTTTGAAGAT TCAAACGCAG GAATGCAATC TGCCGAAGCC
GCAGGATGCC GCGTTTGGGT TTTATCGAGT GACTCTCAAA AAGACCCTCT CACTCGAAAC
CCCTGCCGGG TTGAAAGTCT TGAGGTTGTC TTGAATCAGC TCGTTAATAC AAGCGGCTAA
 
Protein sequence
MTHPPVACLF DLDGLLLDTE PFHGMGWRQA AAQFGGELSD EQLLQLRGRR RRDCAQQVDD 
WLPTPIGIDT LLAVQQPIVR ALLPQAPAMP GAEGLVQHCC DHGIKTALVT SSSREAVAFK
TSHHPWVESI KERIYGDDPQ LAAGKPDPAP YLLAAKRLNV NPSECWAFED SNAGMQSAEA
AGCRVWVLSS DSQKDPLTRN PCRVESLEVV LNQLVNTSG