| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Clim_0139 |
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| Symbol | |
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| ID | 6356104 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium limicola DSM 245 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010803 |
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| Strand | + |
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| Start bp | 154314 |
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| End bp | 154976 |
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| Gene Length | 663 bp |
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| Protein Length | 220 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 642667762 |
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| Product | HAD-superfamily hydrolase, subfamily IA, variant 3 |
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| Protein accession | YP_001942218 |
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| Protein GI | 189345689 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0637] Predicted phosphatase/phosphohexomutase |
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| TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.000437323 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATCGAAG CTGTTTTGTG GGATAATGAC GGTCTGCTTG TTGACAGTGA GGCTCTTTTT
TTTGAGCTGA CAAGAAAGGC TTTTGACGAA GCCGGATTTG AGCTTGACCG TATGTACTGG
GGAGTCGAGT ACCTTGGAAA TGCAAAACAC AGCAGAGAGA TTGCCCGTGA ACTCGGGATG
GAACCCCGGA TTGCCGATAG CGTGATCGAG CGACGGGACG AGGCGTTCCT GAAATCTCTT
GAGGTACCGG TTCCGTTGCT TCCTGAAGTC CGCCGGACTA TCGAAAGTCT TGCAGGAACG
GTCAGACTTG GCCTCGTTAC CGGAAGCCCT CGCGATAAAG TGGAGCGGAT GCATCGCGAT
AACGGACTGC TCGATTATTT CGAGGTTATC ATTACCGACG ATGATATTAC CCGGCCGAAA
CCGCATCCTG AACCATATCT GAAAGCGCTT GAACGGCTTG GTCTCGAAGC TTCCCGATGT
CTTGCCGTCG AGGATTCGCG TCGGGGTCTT GCCTCGGCAC ATGCTGCGGG GATTTCCTGT
ATTGTGGTGC CGAACCAGCT CACCAGCATC CAGCAGTTCG ATCTGGCATT TGCCGTAGAG
GAACGGGCTT CGGGCGTGCT GAAGTACCTT GAGCGTCTTG CCGATGGCGC TTCTCCTGAT
TGA
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| Protein sequence | MIEAVLWDND GLLVDSEALF FELTRKAFDE AGFELDRMYW GVEYLGNAKH SREIARELGM
EPRIADSVIE RRDEAFLKSL EVPVPLLPEV RRTIESLAGT VRLGLVTGSP RDKVERMHRD
NGLLDYFEVI ITDDDITRPK PHPEPYLKAL ERLGLEASRC LAVEDSRRGL ASAHAAGISC
IVVPNQLTSI QQFDLAFAVE ERASGVLKYL ERLADGASPD
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