| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_1514 |
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| Symbol | |
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| ID | 4038317 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | + |
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| Start bp | 1636111 |
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| End bp | 1636842 |
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| Gene Length | 732 bp |
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| Protein Length | 243 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637976898 |
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| Product | phosphoglycolate phosphatase |
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| Protein accession | YP_583666 |
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| Protein GI | 94310456 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0546] Predicted phosphatases |
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| TIGRFAM ID | [TIGR01449] 2-phosphoglycolate phosphatase, prokaryotic
[TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.00414525 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.0000736152 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGCGCTACG ACATCGTCAG TTTCGATCTC GACGGCACGC TGGTGGACAC GGCCGCCGAG
ATTGCCGAGG CCGCCAATCG CGCGCTCGAG TCGCATGGGA TCGCGCGGCG CCCTGTGTCG
GAAGTGACCG TGCTGATCGG CGCCGGCACG CGCGAGCTCA TGCTCAAGCT GTTGGCCCGC
GTCATGATCG AGCAGCCCCA TCTCGCCGAC CGCGTGCACC CGGACCAGGT GCTCGCCAGC
ATGGACGAAC ACTATGCGGT GACCACCGGC ACCTCCAGCG TGCCGTACCC GGGCGCGCTC
GAGGCCCTGA GTGCGCTCAA GGCGGCCGGC ATCAAGCTGG CCTGCGTCAC CAACAAGGAA
TTCCGGCATG CCGAGCGCGT GCTGCGCGTG CACCGGCTCG ACGCCTATTT CGACCTGGTG
GTCGGCGGCG ACTCCCTGCG CGTGAAGAAG CCCGATCCGG GCGTGCTGCG TCATGTCGTC
GAACGACTCG GTGGTAGTAC GGACCGAACC GGACACGTCG GCGACTCGCG CGTCGACGTC
GAGGCAGCCC GCAATGCGGG AGTGACCGCA TGGGCCGTCC CCTACGGCTA CAACGCCGGG
CAGCCGATCG AAGATGCGTA TCCCGAGCGC CTGTTCCCGA GTCTCGCTGA TCTTGCGCAG
CATGTACTCG CCGGCCGGTC CGGCGCACCT TGCGTTTCGC TCACTTCAAC CCAACCCACT
ATCTCATCAT GA
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| Protein sequence | MRYDIVSFDL DGTLVDTAAE IAEAANRALE SHGIARRPVS EVTVLIGAGT RELMLKLLAR
VMIEQPHLAD RVHPDQVLAS MDEHYAVTTG TSSVPYPGAL EALSALKAAG IKLACVTNKE
FRHAERVLRV HRLDAYFDLV VGGDSLRVKK PDPGVLRHVV ERLGGSTDRT GHVGDSRVDV
EAARNAGVTA WAVPYGYNAG QPIEDAYPER LFPSLADLAQ HVLAGRSGAP CVSLTSTQPT
ISS
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