Gene OSTLU_10396 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOSTLU_10396 
Symbol 
ID5003723 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOstreococcus lucimarinus CCE9901 
KingdomEukaryota 
Replicon accessionNC_009363 
Strand
Start bp51115 
End bp51618 
Gene Length504 bp 
Protein Length168 aa 
Translation table 
GC content52% 
IMG OID640419144 
Productpredicted protein 
Protein accessionXP_001419690 
Protein GI145350600 
COG category[R] General function prediction only 
COG ID[COG0637] Predicted phosphatase/phosphohexomutase 
TIGRFAM ID[TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E 


Plasmid Coverage information

Num covering plasmid clones42 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GCATTTTTGT TTGATTTGGA CGGTACTCTT GTGGACACCA CGGATGCCTA CGTCGCGGCT 
TGGCGCGAGA TCCTCGCTCC GATGGGCGCG TTTGTCGACG AAGAATTCTT CCTCAAACAC
ATCAGCGGAC AATCTGACGC CCAAGTCGCG CAGCGTTTCA AGCTGCAGAT TTCGTCAGAG
CAGAAAGACG AAGCGTTCTT GCGATACATC GAAAAGACCA AAGAAATTCC AGGCGCGGTG
GAATTTGTGC AAAAGTGTCG TGCGCTCGGA CCAGTGTCCG TAGTGACTAA TTCCAACAGA
ACCGCCGCCA AAGCTTTGTT GAAACATCTT GCATTGGATG ATTTACCGCT TATTTCCGCG
AGTGACGTGA GATTTGGTAA ACCAAACGCG GAGCCGTACT TGAAAGCGGC GAGAAGACTT
GGAGTCTCGA TCGGAAACTC CATTGTCTTC GAGGACTCTC GATGCGGTTT GATTTCCGGA
CGCGCAGCGG GATGCCAATA CGTC
 
Protein sequence
AFLFDLDGTL VDTTDAYVAA WREILAPMGA FVDEEFFLKH ISGQSDAQVA QRFKLQISSE 
QKDEAFLRYI EKTKEIPGAV EFVQKCRALG PVSVVTNSNR TAAKALLKHL ALDDLPLISA
SDVRFGKPNA EPYLKAARRL GVSIGNSIVF EDSRCGLISG RAAGCQYV