| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_2172 |
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| Symbol | |
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| ID | 6111125 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | - |
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| Start bp | 2419426 |
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| End bp | 2421558 |
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| Gene Length | 2133 bp |
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| Protein Length | 710 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 641621967 |
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| Product | HAD family hydrolase |
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| Protein accession | YP_001749041 |
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| Protein GI | 170721353 |
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| COG category | [G] Carbohydrate transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0246] Mannitol-1-phosphate/altronate dehydrogenases
[COG0637] Predicted phosphatase/phosphohexomutase |
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| TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCTTTT TTCAGGGCAA ACGCATTTTC AGTGCCATCT TCGATATGGA TGGCACCATG
TTCGATACCG AGCGTCTGCG CTTCAAGACG TTGAAACAAG CGTCGCTGGA AATTGCCGGC
AAGGCGCTGA GCGAACAGAC ATTGATCGGC TCGCTGGGCC TGAGCGCGAA AAAGGCCGAG
GCCCTCGCCA AGGCCCATAA CGGTGACGAC TTCCCGTACG CCCGGATCCG CCAGCGCGCC
GATGAGCTTG AGCTGGAGTA CGTGCGCAAT CACGGCGTAC CTATCAAGGC CGGCTTGCTG
GAAGTGCTGG AGCGGCTACG CAAGTCTGGC TTGACCATGG CCGTCGCCAC CTCCAGCCGC
CGCGCCATCG CCGAGGAGTA CCTGATCAAT GCCAATGTGC TCAAGTATTT CGACATCACC
GTGTGTGGCG ACGAAGTCAG CCAAGGCAAG CCCCACCCCG AAATCTTCCT GCGCGCCGCC
ACCGCACTCA ATTGCGAGCC GAGCCAGTGC TTCATGGTCG AAGACTCGGA AAACGGCATG
CTTTCGGCCA TCCGTGCCGA AGGCCAGGCG ATCCTGATCG AAGACATCAA GCCGCCGGCC
GCTGAAGTCA AAGCGGGCGC GCTGAAAGCC TACCGCAGCA TGAATGAATT CCTGGCTGAC
TTGAGCGAGT GCGTGCCTGA TTTGGGCATG CCGCAGCTTG AAGAGCCCTT TCCAGCGTCA
CTGAACCAGT TCCGTGTCGG CATTCACGGG TTCGGGGCCA TCGGCGGCGG CTACCTGACC
CAGGTGTTCT CCCATTGGGA CGGCTACACC CGGCCATGTG AAATCATCGC CGCCACCCGT
TCGCGCATGC TGCGCGAGAC CGTTTCTGCG TTTGGCCGTT ACAGCGTGCG TTACGGCGCC
ACCTCGTTCG ACCAGACCAT CGAAAATGTG CGCATGATCG ACATGGACGA TGCCGAGGCG
GTGATCGACA TGTACAACGC GGCAGAAATC ATCGGCCTGA GCCTACCGGA GCAGGCCATC
CGCAAACAGG CCAAGGTGAT TGCCCAAGGC TTGCTGCGAC GCTTCGAACG CCGGGGCCGT
GACCTGACCA TCCTGATCGT GCTGAACAAG ATCGGTGGCG CCGCTTTCGT GCGCCTGCAC
GTGCAGGCGG AGCTGGAATT GCTGTGCACG CCGGACATCA CTCAACAGAT CCTGCAAAAG
ACCCACTTCG CTGAAACGGT GGTCAGCCGC ATCGTGTCCA AGCTCAGCAA CGAGGCGTTG
GTCCGCCAGT TGCGCATCAA GTCGCAAATG TTCCAGAACA GCCTCGACGA CGAGCCTGCA
CCAGCCAGCA AACCATCCGC GCCGGTACCT GAATACGAGC GCCTGATCTG TCGATTCCGG
CCTTTCGCGC AGTCCAGCAA TGCGATGAGC CAATTGCACC TGATCCTGTT CAACAGCGAG
CCGGACATGC CGTTGTATGT GGAGCGCGGC AGTGACCTGC TGGAGCGTCT GCGCCAGGTG
AAAACGGTCG CCGACATCGC TCAGATCCAG GTCATCAAGA ACCGCTTGTG GAACGGCCCT
CACGCCATCA TTGCCTGGTA TGCAAGCCTG CTGGGCTATG ACTGGGTAGG CCAGGCCATG
GGCGACGACC GAGTCAGTGA ACTGGCCGAG CGTTTGATCA GCCAAGAGGT CGCACCGGCA
CTGGTGGCTG AGAATGCCGA CATGGCAGAG GCAGTGCGCG ATTTTGCCAG TACCTTCCTG
GAGCGCTGCA AAACGTCGTT CAAAGACCCT TGCGCCCGTG TGGGGCGCGA CCCCCTGCGC
AAGCTTCAGC GCAACGAGCG CATCCTGAGC AGTATAGACC TTGCCCACAA GCACGGCATC
GAAACCCCCG GCCTGGCTTT CGGGGCAGCA CTTGGCATTC ACTATGCGTT GCGCTGCAAA
GACAGCAAGG ACCTGGAAGC GCAGACCATC AAGCGGCTTT ACCAGGAGAA CGGCGAAAGC
GTCGAGGCTG TGCTTACCCA CAAGGGCGAT TACAACGGCA AGCCTTACCC GGGGTTGGAC
CCGGTTGGCG ACGCGACGCT GATCGAGGCC ATTGCAGGGA ATTTCAGGCA GTTGCAGCAG
GAGCAGGATT CGCTGATGTA CGCGGCGAAG TGA
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| Protein sequence | MIFFQGKRIF SAIFDMDGTM FDTERLRFKT LKQASLEIAG KALSEQTLIG SLGLSAKKAE
ALAKAHNGDD FPYARIRQRA DELELEYVRN HGVPIKAGLL EVLERLRKSG LTMAVATSSR
RAIAEEYLIN ANVLKYFDIT VCGDEVSQGK PHPEIFLRAA TALNCEPSQC FMVEDSENGM
LSAIRAEGQA ILIEDIKPPA AEVKAGALKA YRSMNEFLAD LSECVPDLGM PQLEEPFPAS
LNQFRVGIHG FGAIGGGYLT QVFSHWDGYT RPCEIIAATR SRMLRETVSA FGRYSVRYGA
TSFDQTIENV RMIDMDDAEA VIDMYNAAEI IGLSLPEQAI RKQAKVIAQG LLRRFERRGR
DLTILIVLNK IGGAAFVRLH VQAELELLCT PDITQQILQK THFAETVVSR IVSKLSNEAL
VRQLRIKSQM FQNSLDDEPA PASKPSAPVP EYERLICRFR PFAQSSNAMS QLHLILFNSE
PDMPLYVERG SDLLERLRQV KTVADIAQIQ VIKNRLWNGP HAIIAWYASL LGYDWVGQAM
GDDRVSELAE RLISQEVAPA LVAENADMAE AVRDFASTFL ERCKTSFKDP CARVGRDPLR
KLQRNERILS SIDLAHKHGI ETPGLAFGAA LGIHYALRCK DSKDLEAQTI KRLYQENGES
VEAVLTHKGD YNGKPYPGLD PVGDATLIEA IAGNFRQLQQ EQDSLMYAAK
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