Gene Caul_0320 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaul_0320 
Symbol 
ID5897594 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaulobacter sp. K31 
KingdomBacteria 
Replicon accessionNC_010338 
Strand
Start bp362073 
End bp362798 
Gene Length726 bp 
Protein Length241 aa 
Translation table11 
GC content68% 
IMG OID641560804 
ProductHAD family hydrolase 
Protein accessionYP_001681955 
Protein GI167644292 
COG category[R] General function prediction only 
COG ID[COG0637] Predicted phosphatase/phosphohexomutase 
TIGRFAM ID[TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.288784 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTGACG ACGCCTCTTT CGATACCTTG CGTTTTCTAG CGGGACGTTT CGAGTTCGCG 
CGGCTCGAGG CCCTGCTGTT CGACATGGAC GGTACGCTCA GCGACACCGA CGCGATCCAC
CGCCAGGCCA TGGCCGACAC CTTCGCCGCC CGGGGCGTCG GCATGAGCGA CGAGGATTTT
CACCGGCATG TGTCGGGCCA GTCGAACGAC GCCATCTTCG CCCACTTCTT TCCCGTCCTC
TCCGAAGACC AGCGCCGGCG CCTGGCCGAC GAGAAGGAGG CGCTCTATCG CCGCCTGACG
CCGCGGATGA CGCCGACGCC AGGGCTTGCG CGGCTGATCG GCTGGGCGAA GGCCAGGGGC
GTGGCCTGCG CGCTGGTCAC CAACGGACCC CGGCTCAATG TCGAGCACAC GCTGAAGGTC
CTTGGCCTCG CCGACAGCTT CGACGCCCTG GTGCTGGGCG AGGACCTGCC GCGCGCCAAG
CCCGATCCGC TCCCCTATCT GGAAGCCCTC CGGCGGCTCG GCGTCGCCGC CGAGCGGGCC
GTGGCCTTCG AGGATTCGGA GCCGGGCGTC ACCGCCGCGC TCGCGGCCGG GGTGTTCACC
GTCGAGATCA CCGGCCCCTC ACGAAGAGAT GGGCTGGGCC TCGGCGCCGA CCTCACCGTG
CCGGATTTCG ATGCACCGGC GCTGTGGTCG CATCTCACCG CAACCAATGT TCACGCTATC
ACTTGA
 
Protein sequence
MPDDASFDTL RFLAGRFEFA RLEALLFDMD GTLSDTDAIH RQAMADTFAA RGVGMSDEDF 
HRHVSGQSND AIFAHFFPVL SEDQRRRLAD EKEALYRRLT PRMTPTPGLA RLIGWAKARG
VACALVTNGP RLNVEHTLKV LGLADSFDAL VLGEDLPRAK PDPLPYLEAL RRLGVAAERA
VAFEDSEPGV TAALAAGVFT VEITGPSRRD GLGLGADLTV PDFDAPALWS HLTATNVHAI
T