| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_3475 |
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| Symbol | |
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| ID | 8134455 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 3919921 |
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| End bp | 3920586 |
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| Gene Length | 666 bp |
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| Protein Length | 221 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 644866776 |
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| Product | HAD-superfamily hydrolase, subfamily IA, variant 3 |
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| Protein accession | YP_003019027 |
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| Protein GI | 253689837 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0637] Predicted phosphatase/phosphohexomutase |
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| TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAAACTA CCGCAGGATT GTTGTTTGAC CTGGATGGAA CACTGCTCGA CACCGACCGG
CTGCATCTGG CCGCGTTTAA TGAACTTCTG GCCGATTTTG GCCAGTCCGT CACGATCGAC
TATTACAACG AAAAAATCAT GGGCGCGCCG ATGGATCAAA TCACGCGCGA TCTGTTCCCC
AATTTATCGC CTGAGCACCG CCATGAACTG GGAGAGCGTA AAGAAGCCCT GTTCAGGAAG
CAGCTTACGG GGCCGCTGGA AGGCCGGCCG GGAGTCACTG AGCTCTTTGA GTGGGCGCAG
GCCAGAAACA TCGGGATCGC CGTGGTGACT AACGCGCCGC GTGAAAGCGC CATCATGATG
TTGAAAGGGC TACATTTGCT GGAGTCCGTT GATCATTTGC TCATTGGCGC GGAACTGCCG
CGTAGCAAGC CCGATCCTTA TCCCTACGCG GAAGCGATGC GACTGCTGGG CGTCGGGCGT
GAAAATGCAT TAGCGTTTGA GGATTCCGGC CCCGGCATTC AGTCGGCGGC GGCGGCGGGG
GTCTTTACTT TCGGTATGAC GGGGGCGCTG GATGAAGCGG CATTGCTGAA GTACGGCGCG
TCTGCGGCGA TCCCCGATTT CAAAGATGAC AAGCTGACGG TCATGCTCAG CAAGCTTAGC
GCCTGA
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| Protein sequence | MKTTAGLLFD LDGTLLDTDR LHLAAFNELL ADFGQSVTID YYNEKIMGAP MDQITRDLFP
NLSPEHRHEL GERKEALFRK QLTGPLEGRP GVTELFEWAQ ARNIGIAVVT NAPRESAIMM
LKGLHLLESV DHLLIGAELP RSKPDPYPYA EAMRLLGVGR ENALAFEDSG PGIQSAAAAG
VFTFGMTGAL DEAALLKYGA SAAIPDFKDD KLTVMLSKLS A
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