| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_1571 |
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| Symbol | |
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| ID | 5869351 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 1769379 |
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| End bp | 1771523 |
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| Gene Length | 2145 bp |
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| Protein Length | 714 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 641546689 |
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| Product | HAD family hydrolase |
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| Protein accession | YP_001667812 |
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| Protein GI | 167032581 |
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| COG category | [G] Carbohydrate transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0246] Mannitol-1-phosphate/altronate dehydrogenases
[COG0637] Predicted phosphatase/phosphohexomutase |
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| TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 0.882263 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTTTTCT TCCAAGGTAA ACAGCTTCTC AGCGCCATCT TCGATATGGA TGGCACCCTC
TTCGACACCG AACGCTTGCG CTTCAAGACA CTCAAGCAAG CCTCTCTTGA AATCTTCGGC
AAAGCGCTGA GCGAGGACAC TTTGATCGGC TCGCTGGGTT TGAGCGCGAA AAAAGCCGAG
GCCCTGGCCA AGGCGCATAA CGGTGAAGAC TTCCCATACA CCGAGATCCG CAAACGCGCG
GATGAACTTG AGCTGGCGTA CGTGCGCAAT CACGGCGTAC CGATCAAGGC CGGCCTGCTG
GAGGTACTGG AACGCCTGCG CAAATCGGGC TTGACCATGG CGGTGGCCAC GTCCAGTCGC
CGTGCCATTG CCGAGGAATA CCTGATCAAC GCCAACGTGC TGAAGTACTT CGACATCACC
GTCTGTGGCG ATGAAGTCAG CCAGGGCAAA CCCCACCCCG AGATTTTCCT GAAAGCTGCC
CGCGCGCTCA ATTGCGAGCC TGGCCAATGC TTCATGGTCG AAGATTCGGA GAACGGCATG
CTGTCGGCCA TCCGTGCTGA AGGCCAGGCG ATACTGATCG AGGACATCAA ACCGCCTGCC
CCAGAAATCA AGGCGGCCGC GCTCAAGGCC TACCGCAGCA TGACCGAGTT CCTGGCCGAC
TTGAGCGAGT GCGTTCCCGA CCTGGGCATG CCCGAACTGA ACGAAAGCTT CCCGGCCTCC
ATGAACCAGT TCCGCGTGGG CATTCATGGT TTCGGCGCCA TCGGGGGTGG CTACCTGACG
CAGGTCTTTT CCCATTGGGA TGGCTACACC CGGCCTTGTG AAATCATCGC CGCGACGCGC
TCGCGCATGC TGCGCGAAAG CGTCAATGCC TTCGGCCGCT ACAGCGTGCG CTATGGGGCT
ACATCGTTCG ACCAGACCAT CGACAACGTG CGCATGATCG ACCTGGACGA TGACGACGCG
GTAATCGGCA TGTACACCAC GGCCGAAATC ATCGGCCTGA GCCTGCCCGA GCAGGCCATC
CGCAACCAGG CGAAGGTGAT TGCCAAAGGG CTGCTGCAAC GTTTCGAACG ACGTGGCCGT
GAGCTTACGT TGCTGATCGT GCTTAACAAG GTGGGCGGCG CCGCGTTCGT GCGCCGCCAT
GTGCAAGCGG AGTTGGCCTT GCTGTGCCCG CCAGCCATCG GCAAGCAAGT GCTGGAAAAG
ACCCATTTCG CCGAAACGGT GGTCAGCCGC ATCGTCTCCA AGCTCAGCAA CGACGCACTG
GTGCGGCAAC TGCGCATCAA GTCGCAGATG TTCCAGAACA GCCTGGAAGA CGAGCCGGCA
GTTGCCACAA AGGCATCGAC GCCAGTGCCT GAATACGAAC GCCTGATCGG GCGCTTCAGG
CCCTTTGCCC AGCCCAGCAG CGCAATGAGC CAGCTGCACC TGATCCTGTT CAACAGCGAG
CCCGACATGC CGCTGTATGT AGAGCACGGC AGCGACCTGC TCGAACGCCT GCGCCAGGTG
AAGACGGTGC CTGACATTGC CCAGATCCAG GTCATCAAGA ACCGCCTGTG GAACGGCCCG
CACGCCATCG TTGCCTGGTA CGCCAGCCTG CTGGGCCATG ACTCGGTAGG CCAAGGCATG
GGCGACGCGC GCGTATGCGA GCTGGCCGAG CGCCTGATTC GCCAGGAAGT CGGCCCCGCA
CTGGTGGCGG AGTACCCGCA AATGGCAGAG GTGGTCAGCC GTTTTGCCGA TACCTTCCTG
GAGCGCTGTA AAACCTCGTT CAAAGACCCT TGCGCCCGGG TGGGACGCGA CCCGTTGCGC
AAGCTACAAC GCAACGAACG CATCCTCAGC AGCATCGACC TTGCCCGCAA GCAGGGTATT
GAAACCCCGG CGCTGGCCTT TGGCGCCGCC CTGGCCATTC ACCATGCCCT GCGCTGCAAG
GACGACAAAG CGCTGGAGGC CCAGGCCATC AGGCAGGTTT ACAGGGACAA CGGCGCCAGT
GTCGAGGCTG TGCTTACCCA TGACGTTGAC TGTAATGGCA AGCGTTTTCC TGGGCTGGAC
CCGATCACGG ACGCGCAGCT GATCAGCGCC ATTTCAGACG CTTTCCGGCA GTACCCGCAA
AGGGATGTAG CAAACCGACT GGACGACCTT TGCATAGGCG CTTGA
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| Protein sequence | MLFFQGKQLL SAIFDMDGTL FDTERLRFKT LKQASLEIFG KALSEDTLIG SLGLSAKKAE
ALAKAHNGED FPYTEIRKRA DELELAYVRN HGVPIKAGLL EVLERLRKSG LTMAVATSSR
RAIAEEYLIN ANVLKYFDIT VCGDEVSQGK PHPEIFLKAA RALNCEPGQC FMVEDSENGM
LSAIRAEGQA ILIEDIKPPA PEIKAAALKA YRSMTEFLAD LSECVPDLGM PELNESFPAS
MNQFRVGIHG FGAIGGGYLT QVFSHWDGYT RPCEIIAATR SRMLRESVNA FGRYSVRYGA
TSFDQTIDNV RMIDLDDDDA VIGMYTTAEI IGLSLPEQAI RNQAKVIAKG LLQRFERRGR
ELTLLIVLNK VGGAAFVRRH VQAELALLCP PAIGKQVLEK THFAETVVSR IVSKLSNDAL
VRQLRIKSQM FQNSLEDEPA VATKASTPVP EYERLIGRFR PFAQPSSAMS QLHLILFNSE
PDMPLYVEHG SDLLERLRQV KTVPDIAQIQ VIKNRLWNGP HAIVAWYASL LGHDSVGQGM
GDARVCELAE RLIRQEVGPA LVAEYPQMAE VVSRFADTFL ERCKTSFKDP CARVGRDPLR
KLQRNERILS SIDLARKQGI ETPALAFGAA LAIHHALRCK DDKALEAQAI RQVYRDNGAS
VEAVLTHDVD CNGKRFPGLD PITDAQLISA ISDAFRQYPQ RDVANRLDDL CIGA
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