| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_2052 |
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| Symbol | |
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| ID | 1042859 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | - |
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| Start bp | 2334330 |
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| End bp | 2336453 |
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| Gene Length | 2124 bp |
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| Protein Length | 707 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637145466 |
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| Product | HAD superfamily hydrolase |
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| Protein accession | NP_744202 |
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| Protein GI | 26988777 |
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| COG category | [G] Carbohydrate transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0246] Mannitol-1-phosphate/altronate dehydrogenases
[COG0637] Predicted phosphatase/phosphohexomutase |
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| TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.380026 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTTTTCT TTCACGGTAA ACAGATTTTC AGCGCCATCT TCGATATGGA TGGCACCCTC
TTCGACACCG AGCGCCTGCG CTTCAGGACA CTCAAGCAAG CTTCTCTGGA AATCTTCGGC
AAAGCGCTGA GCGAGCAGAC CCTGATTGGC TCGCTGGGCC TGAGCGCAAA AAAGGCCGAA
GCCCTCGCCA AGGCGCATAA CGGCGAAGAC TTCCCTTACG CACAAATCCG CCAACGCGCG
GATGAACTTG AACTGGAGTA TGTGCGCAAT CACGGCGTAC CGATCAAGGC CGGCCTGCTG
GAGGTGCTGG AGCGCTTGCG CAAATCAGGC CTGACCATGG CGGTGGCCAC GTCCAGCCGC
CGTGCCATCG CCGAGGAATA CCTGATCAAC GCCAACGTGC TGAAGTACTT CGACATCACC
GTTTGTGGCG ATGAAGTGGG CCAAGGCAAA CCCCACCCCG AGATTTTCCT GAAAGCCGCC
CGCGCGCTCA ATTGCGAGCC AGGCCAGTGC TTCATGGTCG AGGACTCGGA AAACGGCATG
CTGTCAGCGA TGCGCGCCGA AGGGCAGGCG ATCCTGATCG AGGACATCAA GCCGCCTGCG
CCGGAAATCA AGGCAGGCGC GCTCAAAGCC TACCGCAGCA TGCATGAATT TCTCGCCGAC
CTGAGCGAGT GCGTACCCGA CCTGGGCATG CCTGCATTGA GCGAGCCGTT CCCGGCCTCG
ATGAACCAGT TCAGCGTGGG CATTCATGGT TTCGGCGCCA TCGGCGGCGG TTACCTGACG
CAGGTATTTT CCCATTGGGA CGGCTACACC CGACCGCGTG AAATCATTGC CGCAACCCGC
TCGCGCATGC TGCGCGAAAG CGTCAGCGCC TTCGGCCGCT ACAGCGTGCG CTACGGTGCC
ACGTCGTTCG ACCAGACCAT CGACAACGTG CGCATGATCG ACATGGACGA CGACGACGCG
GTCATCAGCA TGTACACCAC TGCCGAAATC ATCGGCCTGA GCCTGCCCGA GCAGGCCATC
AGAAGCCAGG CCAGGGTGAT CGCCCAAGGC CTGCTGCAAC GCTTCGAGCG CCGAGGCCGC
GAGCTGACCC TGCTGATCGT GCTGAACAAG GTTGGCGGTG CAGCGTTCGT GCGGCGTCAT
GTGCAAGCCG AGTTGTCGCT ACTGTGCCCG CCTGCGATCA GCGAGCAGGT TTTGCAGAAG
ACCCATTTCG CCGAAACGGT GGTCAGCCGC ATCGTGTCCA AACTGGGCAA TGACGCGCTG
GTACGGCAGC TGCGCATCAA GTCGCAGATG TTCCAGAACA GCCTGGAAGA CGAGCCCGCA
AGCACACGCA AATCTTCAAC GCCGCTACCG GAGTACGAAC GGCTGATCGG CCACTTCAGG
CCTTTTGCAC AGCCCAGCAG CGCCATGAGC CAGCTGCATC TGGTGCTGTT CAACAGTGAA
GCCGACATGC CGCTTTACGC CGAACGCGGC AGCGATCTGC TCGAACGCCT GCGCCAGGTG
AAGACAGTGC CAGACATTGC CCAGATCCAG ATCATCAAGA ACCGCCTGTG GAACGGCCCG
CACGCCATTG TGGCCTGGTA CGCCAGCCTG CTGGGCCATG CCTGGGTCGG CCAGGGCATG
GGCGATGCGC GGGTGAGTGA ACTGGCCGAG CGCCTGATTC GCCAGGAGGT CGCGCCCGCA
CTGGTGGCCG AATACCCACA GATGGCCGAG GTGGTCAGCC GCTTTGCCGA GGCATTTCTC
GAGCGCTGCA AAACCTCGTT CAAAGACCCC TGCGCCCGGG TAGGCCGCGA CCCCTTGCGC
AAGCTGCAAC GCAACGAACG CATCCTCAGC AGCATCGACC TTGCCCGCAA GCACGGTATT
GCAACCCCGG CCCTGGCGTT TGGCGCCGGG CTCGCCATTC ACCACGCCCT GAACTGCAGC
AACAGCAAGG ACCTGGAAAG CCAGGCAATC AGGCAGGTTT ACCTGGATAA CCAGGAAAGC
GTCGAAGCCG TGCTCACCCA TGCCAACAAA CCTTTCCCCG GGTTGTGCCC CGTCAAGGAC
GCGGAACTGA TCGCTGCCAT CCGTGAAGGC TTCCGCCAAT TGCCACAGCC GGCTCCGCGT
CACGCGGTTG CTGTAGGCTC ATAA
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| Protein sequence | MLFFHGKQIF SAIFDMDGTL FDTERLRFRT LKQASLEIFG KALSEQTLIG SLGLSAKKAE
ALAKAHNGED FPYAQIRQRA DELELEYVRN HGVPIKAGLL EVLERLRKSG LTMAVATSSR
RAIAEEYLIN ANVLKYFDIT VCGDEVGQGK PHPEIFLKAA RALNCEPGQC FMVEDSENGM
LSAMRAEGQA ILIEDIKPPA PEIKAGALKA YRSMHEFLAD LSECVPDLGM PALSEPFPAS
MNQFSVGIHG FGAIGGGYLT QVFSHWDGYT RPREIIAATR SRMLRESVSA FGRYSVRYGA
TSFDQTIDNV RMIDMDDDDA VISMYTTAEI IGLSLPEQAI RSQARVIAQG LLQRFERRGR
ELTLLIVLNK VGGAAFVRRH VQAELSLLCP PAISEQVLQK THFAETVVSR IVSKLGNDAL
VRQLRIKSQM FQNSLEDEPA STRKSSTPLP EYERLIGHFR PFAQPSSAMS QLHLVLFNSE
ADMPLYAERG SDLLERLRQV KTVPDIAQIQ IIKNRLWNGP HAIVAWYASL LGHAWVGQGM
GDARVSELAE RLIRQEVAPA LVAEYPQMAE VVSRFAEAFL ERCKTSFKDP CARVGRDPLR
KLQRNERILS SIDLARKHGI ATPALAFGAG LAIHHALNCS NSKDLESQAI RQVYLDNQES
VEAVLTHANK PFPGLCPVKD AELIAAIREG FRQLPQPAPR HAVAVGS
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