More than 300 homologs were found in PanDaTox collection
for query gene Apar_0864 on replicon NC_013203
Organism: Atopobium parvulum DSM 20469



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013203  Apar_0864  thiamine pyrophosphokinase  100 
 
 
454 aa  935    Atopobium parvulum DSM 20469  Bacteria  unclonable  0.000000134495  normal  0.492449 
 
 
-
 
NC_010816  BLD_0792  beta-phosphoglucomutase  38.95 
 
 
215 aa  122  9.999999999999999e-27  Bifidobacterium longum DJO10A  Bacteria  normal  n/a   
 
 
-
 
NC_013165  Shel_01320  haloacid dehalogenase superfamily protein, subfamily IA, variant 3 with third motif having DD or ED  36.22 
 
 
219 aa  116  7.999999999999999e-25  Slackia heliotrinireducens DSM 20476  Bacteria  normal  normal 
 
 
-
 
NC_013170  Ccur_02490  haloacid dehalogenase superfamily protein, subfamily IA, variant 3 with third motif having DD or ED  30.53 
 
 
224 aa  93.6  7e-18  Cryptobacterium curtum DSM 15641  Bacteria  normal  normal  0.0226409 
 
 
-
 
NC_013131  Caci_2412  HAD-superfamily hydrolase, subfamily IA, variant 3  35 
 
 
222 aa  93.2  8e-18  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_009972  Haur_4152  HAD family hydrolase  30.43 
 
 
217 aa  89  1e-16  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_008262  CPR_0260  haloacid dehalogenase, IA family protein  30.81 
 
 
217 aa  89.4  1e-16  Clostridium perfringens SM101  Bacteria  normal  n/a   
 
 
-
 
NC_013204  Elen_0290  HAD-superfamily hydrolase, subfamily IA, variant 3  29.89 
 
 
222 aa  89.7  1e-16  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_009380  Strop_3972  HAD family hydrolase  35.63 
 
 
241 aa  88.6  2e-16  Salinispora tropica CNB-440  Bacteria  normal  normal 
 
 
-
 
NC_007005  Psyr_5006  HAD family hydrolase  29.77 
 
 
229 aa  86.7  9e-16  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_2212  HAD-superfamily hydrolase, subfamily IA, variant 3  32.79 
 
 
220 aa  86.7  9e-16  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_008261  CPF_0269  haloacid dehalogenase, IA family protein  30.65 
 
 
217 aa  85.9  0.000000000000001  Clostridium perfringens ATCC 13124  Bacteria  normal  n/a   
 
 
-
 
NC_009953  Sare_4356  HAD family hydrolase  34.1 
 
 
233 aa  85.1  0.000000000000002  Salinispora arenicola CNS-205  Bacteria  normal  normal  0.582602 
 
 
-
 
NC_007492  Pfl01_1752  HAD family hydrolase  31.09 
 
 
232 aa  84  0.000000000000006  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_013526  Tter_2485  HAD-superfamily hydrolase, subfamily IA, variant 3  32.14 
 
 
238 aa  81.3  0.00000000000003  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_010001  Cphy_2790  HAD family hydrolase  25.12 
 
 
223 aa  81.3  0.00000000000004  Clostridium phytofermentans ISDg  Bacteria  normal  n/a   
 
 
-
 
NC_013093  Amir_7029  HAD-superfamily hydrolase, subfamily IA, variant 3  31.32 
 
 
213 aa  80.5  0.00000000000006  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013510  Tcur_2293  HAD-superfamily hydrolase, subfamily IA, variant 3  31.61 
 
 
218 aa  79.3  0.0000000000001  Thermomonospora curvata DSM 43183  Bacteria  hitchhiker  0.0000494788  n/a   
 
 
-
 
NC_013132  Cpin_3992  HAD-superfamily hydrolase, subfamily IA, variant 3  29.5 
 
 
218 aa  79.7  0.0000000000001  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.177922  normal  0.23268 
 
 
-
 
NC_013159  Svir_39300  haloacid dehalogenase superfamily protein, subfamily IA, variant 3 with third motif having DD or ED  29.15 
 
 
218 aa  79  0.0000000000002  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal 
 
 
-
 
NC_013202  Hmuk_0670  HAD-superfamily hydrolase, subfamily IA, variant 3  32.97 
 
 
214 aa  78.6  0.0000000000002  Halomicrobium mukohataei DSM 12286  Archaea  normal  normal  0.294369 
 
 
-
 
NC_008254  Meso_3783  HAD family hydrolase  29.79 
 
 
242 aa  79  0.0000000000002  Chelativorans sp. BNC1  Bacteria  normal  0.0711244  n/a   
 
 
-
 
NC_009441  Fjoh_4184  HAD family hydrolase  27.52 
 
 
212 aa  78.6  0.0000000000002  Flavobacterium johnsoniae UW101  Bacteria  normal  n/a   
 
 
-
 
NC_009921  Franean1_1853  HAD family hydrolase  32.66 
 
 
235 aa  78.6  0.0000000000002  Frankia sp. EAN1pec  Bacteria  normal  0.147437  normal  0.0157174 
 
 
-
 
NC_013721  HMPREF0424_0682  HAD hydrolase, family IA, variant 3  30.73 
 
 
226 aa  77.8  0.0000000000003  Gardnerella vaginalis 409-05  Bacteria  n/a    normal 
 
 
-
 
NC_009486  Tpet_1517  HAD family hydrolase  28.49 
 
 
216 aa  78.2  0.0000000000003  Thermotoga petrophila RKU-1  Bacteria  normal  n/a   
 
 
-
 
NC_010483  TRQ2_1566  HAD family hydrolase  28.49 
 
 
216 aa  77.8  0.0000000000004  Thermotoga sp. RQ2  Bacteria  normal  n/a   
 
 
-
 
NC_013171  Apre_0101  HAD-superfamily hydrolase, subfamily IA, variant 3  24.66 
 
 
218 aa  77.8  0.0000000000004  Anaerococcus prevotii DSM 20548  Bacteria  hitchhiker  0.00251058  n/a   
 
 
-
 
NC_004578  PSPTO_5452  HAD-superfamily hydrolase  28.99 
 
 
212 aa  77  0.0000000000006  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_013739  Cwoe_5532  HAD-superfamily hydrolase, subfamily IA, variant 3  33.67 
 
 
214 aa  77  0.0000000000006  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_013235  Namu_2787  HAD-superfamily hydrolase, subfamily IA, variant 3  28.11 
 
 
230 aa  76.6  0.0000000000008  Nakamurella multipartita DSM 44233  Bacteria  hitchhiker  0.00137861  hitchhiker  0.0000132599 
 
 
-
 
NC_011831  Cagg_1516  HAD-superfamily hydrolase, subfamily IA, variant 3  31.84 
 
 
227 aa  76.6  0.0000000000009  Chloroflexus aggregans DSM 9485  Bacteria  normal  normal 
 
 
-
 
NC_010655  Amuc_1509  HAD-superfamily hydrolase, subfamily IA, variant 3  31.18 
 
 
231 aa  76.3  0.000000000001  Akkermansia muciniphila ATCC BAA-835  Bacteria  normal  hitchhiker  0.000193428 
 
 
-
 
NC_013169  Ksed_13910  haloacid dehalogenase superfamily protein, subfamily IA, variant 3 with third motif having DD or ED  30.73 
 
 
232 aa  76.3  0.000000000001  Kytococcus sedentarius DSM 20547  Bacteria  normal  0.491881  normal 
 
 
-
 
NC_007413  Ava_0113  HAD family hydrolase  28.71 
 
 
215 aa  75.5  0.000000000002  Anabaena variabilis ATCC 29413  Bacteria  normal  0.254082  normal  0.189909 
 
 
-
 
NC_013159  Svir_32070  haloacid dehalogenase superfamily enzyme, subfamily IA  32.81 
 
 
227 aa  75.1  0.000000000002  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.466176  normal  0.444114 
 
 
-
 
NC_012793  GWCH70_1743  HAD-superfamily hydrolase, subfamily IA, variant 3  28.27 
 
 
227 aa  74.7  0.000000000003  Geobacillus sp. WCH70  Bacteria  normal  0.293469  n/a   
 
 
-
 
NC_007964  Nham_1198  haloacid dehalogenase-like hydrolase  30.57 
 
 
220 aa  74.3  0.000000000004  Nitrobacter hamburgensis X14  Bacteria  normal  n/a   
 
 
-
 
NC_013730  Slin_0136  HAD-superfamily hydrolase, subfamily IA, variant 3  29.17 
 
 
225 aa  73.9  0.000000000006  Spirosoma linguale DSM 74  Bacteria  normal  normal 
 
 
-
 
NC_010524  Lcho_1765  HAD family hydrolase  30.65 
 
 
236 aa  73.9  0.000000000006  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  0.0140115 
 
 
-
 
NC_013172  Bfae_25290  haloacid dehalogenase superfamily enzyme, subfamily IA  30.2 
 
 
244 aa  73.6  0.000000000007  Brachybacterium faecium DSM 4810  Bacteria  normal  0.0218735  n/a   
 
 
-
 
NC_010571  Oter_1593  beta-phosphoglucomutase family hydrolase  31.87 
 
 
202 aa  73.6  0.000000000007  Opitutus terrae PB90-1  Bacteria  normal  normal  0.113259 
 
 
-
 
NC_005957  BT9727_3945  HAD superfamily hydrolase  29.23 
 
 
221 aa  73.2  0.000000000008  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_013525  Tter_1225  thiamine pyrophosphokinase  31.53 
 
 
230 aa  73.6  0.000000000008  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_007406  Nwi_0649  HAD family hydrolase  30.16 
 
 
220 aa  73.2  0.000000000009  Nitrobacter winogradskyi Nb-255  Bacteria  normal  normal 
 
 
-
 
NC_011773  BCAH820_4222  hydrolase, haloacid dehalogenase-like family  29.23 
 
 
220 aa  73.2  0.000000000009  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_013205  Aaci_2469  HAD-superfamily hydrolase, subfamily IA, variant 3  28.42 
 
 
224 aa  73.2  0.000000000009  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  0.618161  n/a   
 
 
-
 
NC_013216  Dtox_1795  thiamine pyrophosphokinase  29.15 
 
 
216 aa  72.8  0.00000000001  Desulfotomaculum acetoxidans DSM 771  Bacteria  decreased coverage  0.0000771119  normal  0.210862 
 
 
-
 
NC_006274  BCZK3956  HAD superfamily hydrolase  29.23 
 
 
220 aa  73.2  0.00000000001  Bacillus cereus E33L  Bacteria  normal  0.945579  n/a   
 
 
-
 
NC_014210  Ndas_1550  HAD-superfamily hydrolase, subfamily IA, variant 3  29.95 
 
 
249 aa  72.4  0.00000000001  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal  0.204001 
 
 
-
 
NC_013159  Svir_22200  haloacid dehalogenase superfamily protein, subfamily IA, variant 3 with third motif having DD or ED  29.32 
 
 
217 aa  71.6  0.00000000002  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.172111  normal 
 
 
-
 
NC_013552  DhcVS_338  hypothetical protein  28.57 
 
 
456 aa  72  0.00000000002  Dehalococcoides sp. VS  Bacteria  hitchhiker  0.00693249  n/a   
 
 
-
 
NC_005945  BAS4107  HAD superfamily hydrolase  28.72 
 
 
221 aa  71.2  0.00000000003  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_009719  Plav_1089  phosphoglycolate phosphatase  29.73 
 
 
227 aa  71.2  0.00000000003  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.396739  normal 
 
 
-
 
NC_007530  GBAA_4427  HAD superfamily hydrolase  28.72 
 
 
221 aa  71.2  0.00000000003  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_011899  Hore_10160  HAD-superfamily hydrolase, subfamily IA, variant 3  27.75 
 
 
217 aa  71.2  0.00000000003  Halothermothrix orenii H 168  Bacteria  normal  0.64096  n/a   
 
 
-
 
NC_009012  Cthe_0577  thiamine pyrophosphokinase  29.53 
 
 
212 aa  71.2  0.00000000003  Clostridium thermocellum ATCC 27405  Bacteria  normal  n/a   
 
 
-
 
NC_003909  BCE_4276  HAD superfamily hydrolase  29.29 
 
 
220 aa  71.2  0.00000000004  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_014165  Tbis_1853  HAD-superfamily hydrolase  31.11 
 
 
213 aa  70.5  0.00000000006  Thermobispora bispora DSM 43833  Bacteria  normal  normal 
 
 
-
 
NC_013730  Slin_0267  HAD-superfamily hydrolase, subfamily IA, variant 3  29.17 
 
 
220 aa  70.1  0.00000000007  Spirosoma linguale DSM 74  Bacteria  normal  0.583067  normal  0.103324 
 
 
-
 
NC_002936  DET0395  glycoprotease family protein/hydrolase, beta-phosphoglucomutase family  27.23 
 
 
456 aa  69.3  0.0000000001  Dehalococcoides ethenogenes 195  Bacteria  normal  n/a   
 
 
-
 
NC_002976  SERP0789  hypothetical protein  27.66 
 
 
211 aa  69.3  0.0000000001  Staphylococcus epidermidis RP62A  Bacteria  normal  n/a   
 
 
-
 
NC_011071  Smal_0452  HAD-superfamily hydrolase, subfamily IA, variant 3  31.18 
 
 
227 aa  69.3  0.0000000001  Stenotrophomonas maltophilia R551-3  Bacteria  normal  normal 
 
 
-
 
NC_009719  Plav_2303  HAD family hydrolase  30.48 
 
 
230 aa  69.7  0.0000000001  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.432343  normal  0.0684019 
 
 
-
 
NC_011898  Ccel_3242  beta-phosphoglucomutase  28.27 
 
 
219 aa  69.3  0.0000000001  Clostridium cellulolyticum H10  Bacteria  normal  n/a   
 
 
-
 
NC_007333  Tfu_3043  HAD family beta-phosphoglucomutase hydrolase  29.25 
 
 
260 aa  68.9  0.0000000002  Thermobifida fusca YX  Bacteria  normal  0.720241  n/a   
 
 
-
 
NC_007912  Sde_3349  phosphatase/phosphohexomutase-like  26.9 
 
 
221 aa  68.6  0.0000000002  Saccharophagus degradans 2-40  Bacteria  normal  0.0143367  normal  0.0340969 
 
 
-
 
NC_007333  Tfu_2488  HAD family hydrolase  28.32 
 
 
237 aa  68.6  0.0000000003  Thermobifida fusca YX  Bacteria  normal  0.271509  n/a   
 
 
-
 
NC_007604  Synpcc7942_1351  HAD family hydrolase  29.38 
 
 
236 aa  68.2  0.0000000003  Synechococcus elongatus PCC 7942  Bacteria  decreased coverage  0.00941248  normal 
 
 
-
 
NC_011899  Hore_10040  thiamine pyrophosphokinase  28.43 
 
 
215 aa  67.8  0.0000000003  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_011772  BCG9842_B0922  hydrolase, haloacid dehalogenase-like family  28.21 
 
 
235 aa  68.2  0.0000000003  Bacillus cereus G9842  Bacteria  normal  normal 
 
 
-
 
NC_011830  Dhaf_3841  thiamine pyrophosphokinase  29.05 
 
 
231 aa  68.2  0.0000000003  Desulfitobacterium hafniense DCB-2  Bacteria  hitchhiker  0.0000017039  n/a   
 
 
-
 
NC_013730  Slin_2846  HAD-superfamily hydrolase, subfamily IA, variant 3  28.22 
 
 
226 aa  68.2  0.0000000003  Spirosoma linguale DSM 74  Bacteria  normal  0.281035  normal  0.462582 
 
 
-
 
NC_009455  DehaBAV1_0374  HAD family hydrolase  25.79 
 
 
456 aa  67.4  0.0000000004  Dehalococcoides sp. BAV1  Bacteria  hitchhiker  0.0000852801  n/a   
 
 
-
 
NC_010814  Glov_1614  HAD-superfamily hydrolase, subfamily IA, variant 3  26.92 
 
 
224 aa  67.4  0.0000000005  Geobacter lovleyi SZ  Bacteria  normal  0.0147527  n/a   
 
 
-
 
NC_009767  Rcas_3607  thiamine pyrophosphokinase  27.98 
 
 
224 aa  67.4  0.0000000005  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal  0.945813 
 
 
-
 
NC_011884  Cyan7425_0537  HAD-superfamily hydrolase, subfamily IA, variant 1  29.02 
 
 
260 aa  67.4  0.0000000005  Cyanothece sp. PCC 7425  Bacteria  normal  normal 
 
 
-
 
NC_009972  Haur_2676  thiamine pyrophosphokinase  28.24 
 
 
217 aa  67  0.0000000006  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_014212  Mesil_0179  HAD-superfamily hydrolase, subfamily IA, variant 3  29.63 
 
 
218 aa  67  0.0000000006  Meiothermus silvanus DSM 9946  Bacteria  normal  normal 
 
 
-
 
NC_009767  Rcas_0853  HAD family hydrolase  30.9 
 
 
221 aa  67  0.0000000007  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal  0.0114666 
 
 
-
 
NC_011831  Cagg_0426  thiamine pyrophosphokinase  26.15 
 
 
213 aa  67  0.0000000007  Chloroflexus aggregans DSM 9485  Bacteria  normal  normal 
 
 
-
 
NC_013203  Apar_0889  HAD-superfamily hydrolase, subfamily IA, variant 3  27.32 
 
 
220 aa  66.6  0.0000000008  Atopobium parvulum DSM 20469  Bacteria  decreased coverage  0.00000345367  normal  0.0902559 
 
 
-
 
NC_008578  Acel_1175  HAD family hydrolase  31.32 
 
 
263 aa  66.6  0.0000000008  Acidothermus cellulolyticus 11B  Bacteria  normal  normal 
 
 
-
 
NC_013730  Slin_0811  HAD-superfamily hydrolase, subfamily IA, variant 3  29.23 
 
 
225 aa  66.6  0.0000000008  Spirosoma linguale DSM 74  Bacteria  normal  normal  0.332678 
 
 
-
 
NC_008148  Rxyl_0905  HAD family hydrolase  33.33 
 
 
204 aa  66.6  0.0000000009  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  0.427836  n/a   
 
 
-
 
NC_010571  Oter_4626  HAD family hydrolase  26.88 
 
 
213 aa  66.6  0.0000000009  Opitutus terrae PB90-1  Bacteria  normal  0.317625  normal 
 
 
-
 
NC_010084  Bmul_0864  HAD family hydrolase  31.91 
 
 
226 aa  66.6  0.0000000009  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal 
 
 
-
 
NC_011004  Rpal_4817  HAD-superfamily hydrolase, subfamily IA, variant 3  29.28 
 
 
235 aa  65.9  0.000000001  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.821962  n/a   
 
 
-
 
NC_010184  BcerKBAB4_4056  HAD family hydrolase  28.21 
 
 
215 aa  66.2  0.000000001  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_010831  Cphamn1_2486  beta-phosphoglucomutase family hydrolase  29.67 
 
 
232 aa  66.2  0.000000001  Chlorobium phaeobacteroides BS1  Bacteria  normal  0.24904  normal 
 
 
-
 
NC_011725  BCB4264_A4313  hydrolase, haloacid dehalogenase-like family  27.69 
 
 
235 aa  65.9  0.000000001  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_012034  Athe_1805  thiamine pyrophosphokinase  26.13 
 
 
211 aa  66.2  0.000000001  Anaerocellum thermophilum DSM 6725  Bacteria  normal  0.219265  n/a   
 
 
-
 
NC_008312  Tery_0680  HAD family hydrolase  28.27 
 
 
227 aa  65.9  0.000000001  Trichodesmium erythraeum IMS101  Bacteria  normal  normal  0.0123656 
 
 
-
 
NC_008346  Swol_2104  thiamine pyrophosphokinase  29.59 
 
 
219 aa  66.2  0.000000001  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  normal  n/a   
 
 
-
 
NC_011898  Ccel_1538  thiamine pyrophosphokinase  27.59 
 
 
211 aa  65.9  0.000000001  Clostridium cellulolyticum H10  Bacteria  normal  n/a   
 
 
-
 
NC_013162  Coch_0670  beta-phosphoglucomutase  27.69 
 
 
207 aa  65.5  0.000000002  Capnocytophaga ochracea DSM 7271  Bacteria  normal  0.922957  n/a   
 
 
-
 
NC_009486  Tpet_0039  thiamine pyrophosphokinase  26.87 
 
 
202 aa  65.9  0.000000002  Thermotoga petrophila RKU-1  Bacteria  hitchhiker  0.0000099633  n/a   
 
 
-
 
NC_010483  TRQ2_0039  thiamine pyrophosphokinase  26.87 
 
 
202 aa  65.9  0.000000002  Thermotoga sp. RQ2  Bacteria  normal  n/a   
 
 
-
 
NC_013132  Cpin_5088  beta-phosphoglucomutase  30.3 
 
 
219 aa  65.9  0.000000002  Chitinophaga pinensis DSM 2588  Bacteria  decreased coverage  0.00016924  normal  0.408522 
 
 
-
 
NC_012791  Vapar_3792  HAD-superfamily hydrolase, subfamily IA, variant 3  29.29 
 
 
229 aa  65.1  0.000000002  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
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