More than 300 homologs were found in PanDaTox collection
for query gene Svir_39300 on replicon NC_013159
Organism: Saccharomonospora viridis DSM 43017



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013159  Svir_39300  haloacid dehalogenase superfamily protein, subfamily IA, variant 3 with third motif having DD or ED  100 
 
 
218 aa  429  1e-119  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_7029  HAD-superfamily hydrolase, subfamily IA, variant 3  67.14 
 
 
213 aa  270  1e-71  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_009921  Franean1_1853  HAD family hydrolase  54.03 
 
 
235 aa  194  8.000000000000001e-49  Frankia sp. EAN1pec  Bacteria  normal  0.147437  normal  0.0157174 
 
 
-
 
NC_009953  Sare_4356  HAD family hydrolase  51.17 
 
 
233 aa  187  8e-47  Salinispora arenicola CNS-205  Bacteria  normal  normal  0.582602 
 
 
-
 
NC_009380  Strop_3972  HAD family hydrolase  50.93 
 
 
241 aa  187  2e-46  Salinispora tropica CNB-440  Bacteria  normal  normal 
 
 
-
 
NC_008148  Rxyl_0905  HAD family hydrolase  48.26 
 
 
204 aa  181  9.000000000000001e-45  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  0.427836  n/a   
 
 
-
 
NC_013159  Svir_32070  haloacid dehalogenase superfamily enzyme, subfamily IA  48.26 
 
 
227 aa  176  3e-43  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.466176  normal  0.444114 
 
 
-
 
NC_013526  Tter_2485  HAD-superfamily hydrolase, subfamily IA, variant 3  43.32 
 
 
238 aa  165  4e-40  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_013947  Snas_4073  HAD-superfamily hydrolase subfamily IA, variant 3  45.16 
 
 
219 aa  152  2.9999999999999998e-36  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.358464  normal 
 
 
-
 
NC_008786  Veis_2048  HAD family hydrolase  39.27 
 
 
238 aa  140  1.9999999999999998e-32  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.539587  normal  0.409572 
 
 
-
 
NC_014210  Ndas_1550  HAD-superfamily hydrolase, subfamily IA, variant 3  38.19 
 
 
249 aa  114  7.999999999999999e-25  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal  0.204001 
 
 
-
 
NC_009901  Spea_0424  2-deoxyglucose-6-phosphatase  32.13 
 
 
222 aa  112  4.0000000000000004e-24  Shewanella pealeana ATCC 700345  Bacteria  normal  n/a   
 
 
-
 
NC_007954  Sden_3378  2-deoxyglucose-6-phosphatase  31.11 
 
 
225 aa  108  6e-23  Shewanella denitrificans OS217  Bacteria  normal  n/a   
 
 
-
 
NC_010320  Teth514_1040  HAD family hydrolase  33.01 
 
 
226 aa  107  1e-22  Thermoanaerobacter sp. X514  Bacteria  hitchhiker  0.00000171478  n/a   
 
 
-
 
NC_009092  Shew_3425  2-deoxyglucose-6-phosphatase  31.22 
 
 
223 aa  106  3e-22  Shewanella loihica PV-4  Bacteria  hitchhiker  0.000919178  normal 
 
 
-
 
NC_009831  Ssed_0437  2-deoxyglucose-6-phosphatase  29.3 
 
 
221 aa  104  1e-21  Shewanella sediminis HAW-EB3  Bacteria  hitchhiker  0.000647119  hitchhiker  0.00000756317 
 
 
-
 
NC_008312  Tery_0680  HAD family hydrolase  30.19 
 
 
227 aa  104  1e-21  Trichodesmium erythraeum IMS101  Bacteria  normal  normal  0.0123656 
 
 
-
 
NC_007958  RPD_3933  HAD family hydrolase  32.39 
 
 
271 aa  102  5e-21  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_010003  Pmob_0452  HAD family hydrolase  31.73 
 
 
221 aa  102  6e-21  Petrotoga mobilis SJ95  Bacteria  normal  n/a   
 
 
-
 
NC_013132  Cpin_6618  HAD-superfamily hydrolase, subfamily IA, variant 3  33.33 
 
 
217 aa  101  8e-21  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.022243  hitchhiker  0.00896914 
 
 
-
 
NC_009997  Sbal195_4047  2-deoxyglucose-6-phosphatase  31.19 
 
 
219 aa  101  9e-21  Shewanella baltica OS195  Bacteria  hitchhiker  0.0000965281  normal  0.234971 
 
 
-
 
NC_011663  Sbal223_3849  2-deoxyglucose-6-phosphatase  30.23 
 
 
219 aa  101  1e-20  Shewanella baltica OS223  Bacteria  normal  0.184484  hitchhiker  0.000000000456944 
 
 
-
 
NC_010506  Swoo_0284  2-deoxyglucose-6-phosphatase  29.49 
 
 
221 aa  100  1e-20  Shewanella woodyi ATCC 51908  Bacteria  normal  hitchhiker  0.00458991 
 
 
-
 
NC_013169  Ksed_13910  haloacid dehalogenase superfamily protein, subfamily IA, variant 3 with third motif having DD or ED  33.84 
 
 
232 aa  101  1e-20  Kytococcus sedentarius DSM 20547  Bacteria  normal  0.491881  normal 
 
 
-
 
NC_008345  Sfri_3772  2-deoxyglucose-6-phosphatase  30.57 
 
 
218 aa  101  1e-20  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_009012  Cthe_3073  HAD family hydrolase  29.02 
 
 
223 aa  100  1e-20  Clostridium thermocellum ATCC 27405  Bacteria  hitchhiker  0.00582956  n/a   
 
 
-
 
NC_013595  Sros_5916  HAD family hydrolase  35.68 
 
 
218 aa  100  1e-20  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0345843  normal  0.0351614 
 
 
-
 
NC_008321  Shewmr4_0436  2-deoxyglucose-6-phosphatase  31.84 
 
 
218 aa  100  2e-20  Shewanella sp. MR-4  Bacteria  unclonable  0.0000000024214  normal 
 
 
-
 
NC_008700  Sama_0381  2-deoxyglucose-6-phosphatase  32.27 
 
 
221 aa  100  2e-20  Shewanella amazonensis SB2B  Bacteria  hitchhiker  0.0071153  normal  0.324571 
 
 
-
 
NC_004116  SAG0181  HAD superfamily hydrolase  33.5 
 
 
214 aa  99.8  3e-20  Streptococcus agalactiae 2603V/R  Bacteria  normal  n/a   
 
 
-
 
NC_004347  SO_0431  2-deoxyglucose-6-phosphatase  29.86 
 
 
217 aa  99.4  3e-20  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_013131  Caci_2412  HAD-superfamily hydrolase, subfamily IA, variant 3  35.52 
 
 
222 aa  99  5e-20  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_008577  Shewana3_0432  2-deoxyglucose-6-phosphatase  31.84 
 
 
218 aa  99  5e-20  Shewanella sp. ANA-3  Bacteria  unclonable  0.00000000498152  normal 
 
 
-
 
NC_009665  Shew185_3926  2-deoxyglucose-6-phosphatase  29.82 
 
 
219 aa  98.2  9e-20  Shewanella baltica OS185  Bacteria  hitchhiker  0.00000000238408  n/a   
 
 
-
 
NC_008322  Shewmr7_3593  2-deoxyglucose-6-phosphatase  30.94 
 
 
218 aa  97.8  1e-19  Shewanella sp. MR-7  Bacteria  unclonable  0.0000011766  normal  0.672534 
 
 
-
 
NC_009052  Sbal_3906  2-deoxyglucose-6-phosphatase  29.82 
 
 
219 aa  97.8  1e-19  Shewanella baltica OS155  Bacteria  unclonable  0.000000000443869  n/a   
 
 
-
 
NC_007492  Pfl01_1752  HAD family hydrolase  36.13 
 
 
232 aa  96.7  2e-19  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_010001  Cphy_2790  HAD family hydrolase  33.16 
 
 
223 aa  96.7  3e-19  Clostridium phytofermentans ISDg  Bacteria  normal  n/a   
 
 
-
 
NC_009438  Sputcn32_3410  2-deoxyglucose-6-phosphatase  29.63 
 
 
217 aa  95.9  4e-19  Shewanella putrefaciens CN-32  Bacteria  normal  0.0110715  n/a   
 
 
-
 
NC_007778  RPB_1286  HAD family hydrolase  32.55 
 
 
229 aa  95.5  6e-19  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_013730  Slin_2846  HAD-superfamily hydrolase, subfamily IA, variant 3  32 
 
 
226 aa  94.4  1e-18  Spirosoma linguale DSM 74  Bacteria  normal  0.281035  normal  0.462582 
 
 
-
 
NC_014165  Tbis_1853  HAD-superfamily hydrolase  36.22 
 
 
213 aa  94.4  1e-18  Thermobispora bispora DSM 43833  Bacteria  normal  normal 
 
 
-
 
NC_011899  Hore_10160  HAD-superfamily hydrolase, subfamily IA, variant 3  32.11 
 
 
217 aa  93.6  2e-18  Halothermothrix orenii H 168  Bacteria  normal  0.64096  n/a   
 
 
-
 
NC_011205  SeD_A2022  2-deoxyglucose-6-phosphatase  33.18 
 
 
222 aa  93.6  2e-18  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  normal 
 
 
-
 
NC_011080  SNSL254_A1436  2-deoxyglucose-6-phosphatase  33.18 
 
 
222 aa  93.6  2e-18  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  0.905236  normal 
 
 
-
 
NC_007778  RPB_0589  HAD family hydrolase  36.36 
 
 
217 aa  93.6  2e-18  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_011083  SeHA_C1451  2-deoxyglucose-6-phosphatase  33.18 
 
 
222 aa  93.6  2e-18  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  0.913842  normal 
 
 
-
 
NC_011149  SeAg_B1849  2-deoxyglucose-6-phosphatase  33.18 
 
 
222 aa  93.6  2e-18  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  hitchhiker  0.0029739  n/a   
 
 
-
 
NC_009485  BBta_0045  putative haloacid dehalogenase-like hydrolase  33.64 
 
 
232 aa  93.6  2e-18  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.605496  normal  0.617373 
 
 
-
 
NC_011004  Rpal_4817  HAD-superfamily hydrolase, subfamily IA, variant 3  32.87 
 
 
235 aa  93.6  2e-18  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.821962  n/a   
 
 
-
 
NC_007005  Psyr_5006  HAD family hydrolase  33.16 
 
 
229 aa  92.8  4e-18  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_011094  SeSA_A1419  2-deoxyglucose-6-phosphatase  32.23 
 
 
222 aa  92.4  4e-18  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  0.744627  hitchhiker  0.00259415 
 
 
-
 
NC_007958  RPD_0243  HAD family hydrolase  35.96 
 
 
217 aa  92.8  4e-18  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_013510  Tcur_2293  HAD-superfamily hydrolase, subfamily IA, variant 3  35.8 
 
 
218 aa  92.4  5e-18  Thermomonospora curvata DSM 43183  Bacteria  hitchhiker  0.0000494788  n/a   
 
 
-
 
NC_008463  PA14_07310  putative hydrolase  36.56 
 
 
224 aa  92.4  5e-18  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.642028  normal  0.985429 
 
 
-
 
NC_012848  Rleg_4948  HAD-superfamily hydrolase, subfamily IA, variant 3  33.64 
 
 
223 aa  91.7  7e-18  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal 
 
 
-
 
NC_008699  Noca_2632  HAD family hydrolase  33.16 
 
 
218 aa  92  7e-18  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_013457  VEA_000391  2-deoxyglucose-6-phosphate hydrolase YniC  29.19 
 
 
218 aa  91.7  8e-18  Vibrio sp. Ex25  Bacteria  normal  0.0106831  n/a   
 
 
-
 
NC_009801  EcE24377A_1947  2-deoxyglucose-6-phosphatase  31.75 
 
 
222 aa  91.3  1e-17  Escherichia coli E24377A  Bacteria  normal  0.504113  n/a   
 
 
-
 
NC_010498  EcSMS35_1464  2-deoxyglucose-6-phosphatase  31.75 
 
 
222 aa  91.3  1e-17  Escherichia coli SMS-3-5  Bacteria  normal  normal 
 
 
-
 
NC_008309  HS_0674  phosphatase  26.89 
 
 
215 aa  90.9  1e-17  Haemophilus somnus 129PT  Bacteria  normal  n/a   
 
 
-
 
NC_013037  Dfer_4825  HAD-superfamily hydrolase, subfamily IA, variant 3  34.54 
 
 
224 aa  90.9  1e-17  Dyadobacter fermentans DSM 18053  Bacteria  normal  normal 
 
 
-
 
NC_010658  SbBS512_E1972  2-deoxyglucose-6-phosphatase  31.75 
 
 
222 aa  91.3  1e-17  Shigella boydii CDC 3083-94  Bacteria  normal  n/a   
 
 
-
 
NC_011353  ECH74115_2445  2-deoxyglucose-6-phosphatase  31.75 
 
 
222 aa  91.3  1e-17  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  normal 
 
 
-
 
NC_008726  Mvan_3473  HAD family hydrolase  36.13 
 
 
243 aa  90.9  1e-17  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal 
 
 
-
 
NC_008783  BARBAKC583_0412  HAD family hydrolase  30.22 
 
 
230 aa  90.9  1e-17  Bartonella bacilliformis KC583  Bacteria  normal  0.983661  n/a   
 
 
-
 
CP001509  ECD_01696  predicted hydrolase  32.55 
 
 
222 aa  90.5  2e-17  Escherichia coli BL21(DE3)  Bacteria  normal  n/a   
 
 
-
 
CP001637  EcDH1_1915  HAD-superfamily hydrolase, subfamily IA, variant 3  32.55 
 
 
222 aa  90.5  2e-17  Escherichia coli DH1  Bacteria  normal  0.752357  n/a   
 
 
-
 
NC_009800  EcHS_A1808  2-deoxyglucose-6-phosphatase  32.55 
 
 
222 aa  90.5  2e-17  Escherichia coli HS  Bacteria  normal  0.305682  n/a   
 
 
-
 
NC_010468  EcolC_1905  2-deoxyglucose-6-phosphatase  32.55 
 
 
222 aa  90.5  2e-17  Escherichia coli ATCC 8739  Bacteria  normal  0.798501  normal  0.727123 
 
 
-
 
NC_012892  B21_01684  hypothetical protein  32.55 
 
 
222 aa  90.5  2e-17  Escherichia coli BL21  Bacteria  normal  n/a   
 
 
-
 
NC_009656  PSPA7_0665  haloacid dehalogenase, IA family protein  36.12 
 
 
231 aa  89.7  3e-17  Pseudomonas aeruginosa PA7  Bacteria  normal  0.233376  n/a   
 
 
-
 
NC_011661  Dtur_0461  HAD-superfamily hydrolase, subfamily IA, variant 3  29.36 
 
 
217 aa  89.7  3e-17  Dictyoglomus turgidum DSM 6724  Bacteria  normal  n/a   
 
 
-
 
NC_007912  Sde_3349  phosphatase/phosphohexomutase-like  33.86 
 
 
221 aa  89.7  3e-17  Saccharophagus degradans 2-40  Bacteria  normal  0.0143367  normal  0.0340969 
 
 
-
 
NC_013530  Xcel_1481  HAD-superfamily hydrolase, subfamily IA, variant 3  34.17 
 
 
233 aa  89.4  4e-17  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_013093  Amir_2212  HAD-superfamily hydrolase, subfamily IA, variant 3  36.36 
 
 
220 aa  89.4  4e-17  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013172  Bfae_25290  haloacid dehalogenase superfamily enzyme, subfamily IA  35.33 
 
 
244 aa  89  5e-17  Brachybacterium faecium DSM 4810  Bacteria  normal  0.0218735  n/a   
 
 
-
 
NC_009952  Dshi_0545  HAD-superfamily hydrolase  34.24 
 
 
246 aa  88.6  7e-17  Dinoroseobacter shibae DFL 12  Bacteria  normal  normal 
 
 
-
 
NC_014151  Cfla_2008  HAD-superfamily hydrolase, subfamily IA, variant 3  35.64 
 
 
213 aa  88.6  8e-17  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.296794  normal 
 
 
-
 
NC_009436  Ent638_1717  2-deoxyglucose-6-phosphatase  31.28 
 
 
223 aa  88.2  9e-17  Enterobacter sp. 638  Bacteria  normal  normal  0.886251 
 
 
-
 
NC_013235  Namu_2787  HAD-superfamily hydrolase, subfamily IA, variant 3  30 
 
 
230 aa  87.8  1e-16  Nakamurella multipartita DSM 44233  Bacteria  hitchhiker  0.00137861  hitchhiker  0.0000132599 
 
 
-
 
NC_014230  CA2559_05080  predicted phosphatase/phosphohexomutase  28.12 
 
 
227 aa  87.4  1e-16  Croceibacter atlanticus HTCC2559  Bacteria  normal  0.071348  n/a   
 
 
-
 
NC_012917  PC1_1912  2-deoxyglucose-6-phosphatase  30.81 
 
 
223 aa  87.8  1e-16  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  0.0120822  n/a   
 
 
-
 
NC_002977  MCA0959  HAD-superfamily hydrolase, subfamily IA, variant 3 family protein  32.72 
 
 
216 aa  86.7  2e-16  Methylococcus capsulatus str. Bath  Bacteria  normal  0.0734377  n/a   
 
 
-
 
NC_013174  Jden_1197  HAD-superfamily hydrolase, subfamily IA, variant 3  30.73 
 
 
225 aa  87  2e-16  Jonesia denitrificans DSM 20603  Bacteria  normal  0.0955551  normal  0.148864 
 
 
-
 
NC_009719  Plav_2303  HAD family hydrolase  34.27 
 
 
230 aa  87.4  2e-16  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.432343  normal  0.0684019 
 
 
-
 
NC_013162  Coch_0471  HAD-superfamily hydrolase, subfamily IA, variant 3  27.89 
 
 
210 aa  87.4  2e-16  Capnocytophaga ochracea DSM 7271  Bacteria  normal  n/a   
 
 
-
 
NC_004578  PSPTO_5452  HAD-superfamily hydrolase  32.98 
 
 
212 aa  86.3  3e-16  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_009456  VC0395_0037  haloacid dehalogenase/epoxide hydrolase family protein  29.82 
 
 
219 aa  86.3  3e-16  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_009654  Mmwyl1_0641  HAD family hydrolase  25.12 
 
 
220 aa  86.7  3e-16  Marinomonas sp. MWYL1  Bacteria  normal  0.950078  normal  0.0427696 
 
 
-
 
NC_007604  Synpcc7942_1351  HAD family hydrolase  33.68 
 
 
236 aa  85.9  4e-16  Synechococcus elongatus PCC 7942  Bacteria  decreased coverage  0.00941248  normal 
 
 
-
 
NC_009012  Cthe_0780  HAD family hydrolase  26.7 
 
 
227 aa  86.3  4e-16  Clostridium thermocellum ATCC 27405  Bacteria  normal  n/a   
 
 
-
 
NC_011071  Smal_0452  HAD-superfamily hydrolase, subfamily IA, variant 3  34.25 
 
 
227 aa  85.1  7e-16  Stenotrophomonas maltophilia R551-3  Bacteria  normal  normal 
 
 
-
 
NC_013421  Pecwa_2205  2-deoxyglucose-6-phosphatase  31.79 
 
 
221 aa  85.1  8e-16  Pectobacterium wasabiae WPP163  Bacteria  normal  0.100097  n/a   
 
 
-
 
NC_003909  BCE_4276  HAD superfamily hydrolase  29.17 
 
 
220 aa  84.3  0.000000000000001  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_007493  RSP_0089  hypothetical protein  33.78 
 
 
228 aa  84.3  0.000000000000001  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.16166  n/a   
 
 
-
 
NC_009441  Fjoh_2690  HAD family hydrolase  29.26 
 
 
221 aa  84.3  0.000000000000001  Flavobacterium johnsoniae UW101  Bacteria  normal  0.365385  n/a   
 
 
-
 
NC_008025  Dgeo_1330  HAD family hydrolase  38.46 
 
 
230 aa  83.6  0.000000000000002  Deinococcus geothermalis DSM 11300  Bacteria  normal  normal 
 
 
-
 
NC_013172  Bfae_25280  haloacid dehalogenase superfamily protein, subfamily IA, variant 3 with third motif having DD or ED  36.46 
 
 
226 aa  83.2  0.000000000000003  Brachybacterium faecium DSM 4810  Bacteria  normal  0.0213796  n/a   
 
 
-
 
NC_011725  BCB4264_A4313  hydrolase, haloacid dehalogenase-like family  30.16 
 
 
235 aa  83.2  0.000000000000003  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
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