Gene Spea_0424 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_0424 
Symbol 
ID5660824 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand
Start bp525248 
End bp525916 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content43% 
IMG OID641234961 
Product2-deoxyglucose-6-phosphatase 
Protein accessionYP_001500287 
Protein GI157960253 
COG category[R] General function prediction only 
COG ID[COG0637] Predicted phosphatase/phosphohexomutase 
TIGRFAM ID[TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTACAC CAGAGCTAAA AGCCGTTATT TTCGACATGG ACGGCGTATT GATCGACTCG 
GAGCCAGTTT GGCAAATAGC CGAGTATAGG GTGCTGAGCG AGTTAGGTTT AAACATATCT
ATGCAAGATA TGCTTCTAAC TACGGGACTC AGAATCGATC AGGTTGTTGA TTATTGGTAT
GCGCGCTTTC CGTGGAAAAA CTATGATAAC CAACAAACGG CTCAAGCCAT TGTCGATCAG
GTTGTTAGCC ATATTGCAGC CAACGGTGAA CCGATGAAGG GCGTATTATC AGCGCTTAAT
GCTTGTAGAG AACGAGGGCT AAAAGTCGGT CTAGCCACCT CCTCTTCGAG CGATATTATT
AATGCCGTTT TAAACAAGTT AGAGATAGCC ACATATTTTC AAGCAATCAA ATCGGCTGAG
CATTTAACCT ATGGAAAACC CCACCCCGAA GTCTATTTAA ATTGTGCTCA GGCGCTTAAT
ATTGATCCTA TCTATTGTTT AGCCATTGAA GATTCATTTA ATGGATTAAT CGCCGCCCGT
GCAGCTAACA TGCAAACAGC TGCGATCCCT GACCCACAAC AAGCCGACCT TAGTAAGTGG
GTCGTAGCCC ATAAGCAACT CAATAGCCTA GAAGATTTAC CTGAGTATTT AATGTACTTA
CGACCATAA
 
Protein sequence
MSTPELKAVI FDMDGVLIDS EPVWQIAEYR VLSELGLNIS MQDMLLTTGL RIDQVVDYWY 
ARFPWKNYDN QQTAQAIVDQ VVSHIAANGE PMKGVLSALN ACRERGLKVG LATSSSSDII
NAVLNKLEIA TYFQAIKSAE HLTYGKPHPE VYLNCAQALN IDPIYCLAIE DSFNGLIAAR
AANMQTAAIP DPQQADLSKW VVAHKQLNSL EDLPEYLMYL RP