| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_6618 |
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| Symbol | |
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| ID | 8362806 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 8300181 |
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| End bp | 8300834 |
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| Gene Length | 654 bp |
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| Protein Length | 217 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 644968750 |
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| Product | HAD-superfamily hydrolase, subfamily IA, variant 3 |
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| Protein accession | YP_003126223 |
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| Protein GI | 256425570 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0637] Predicted phosphatase/phosphohexomutase |
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| TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.022243 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.00896914 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGATAAACA CGGTGATTTT TGACATGGAC GGGTTGCTGA TTGACTCCGA GCCACTTTGG
GGCAGAGCTA TGAGGGAAGT TTTCGCGACC GTAGGCGTTG ACCTGACCAT GGAACTGGCC
AGCCACACTA CCGGCCTTCG TACGGCTGAG GTGGTTGATT ACTGGCATAA TTACTTCAAA
TGGGAGGGTA AAAACAATGA ACAGGTTACC AACGAGATCA TCGATGCGGT GATTGCCAAG
ATAATGGCGG AGGGTGAAGC GATGGAGGGA CTTGAATACA TCCTGGATTA TTTCGATAAA
AAGAACTTCA AAATAGGACT GGCTTCTTCT TCTCCCCTGC GTCTGATCGA ATCGGCGGTT
GACCATATGG GCATCAGGGA TCGGTTTCAG GTGATTTCTT CTGCGGAGTT TGAATCACAT
GGTAAACCGC ACCCGGCAGT ATACCTGACC TGCGCTAAAA AGCTGGGTAG TACGCCGCTG
CAATGTGTGG CATTTGAAGA TTCTGTGACT GGTATGACCG CGGCAAAAGC AGCGCGTATG
AAGACAGTAG TTGTGCCGGA AGCACATAAC CGTCAGAATA AACGTTATGC GCTGGCTGAC
ATACAGCTGG ATTCCCTATT AGACTTCAAT GATGAGATCC TGAAGCAACT GTGA
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| Protein sequence | MINTVIFDMD GLLIDSEPLW GRAMREVFAT VGVDLTMELA SHTTGLRTAE VVDYWHNYFK
WEGKNNEQVT NEIIDAVIAK IMAEGEAMEG LEYILDYFDK KNFKIGLASS SPLRLIESAV
DHMGIRDRFQ VISSAEFESH GKPHPAVYLT CAKKLGSTPL QCVAFEDSVT GMTAAKAARM
KTVVVPEAHN RQNKRYALAD IQLDSLLDFN DEILKQL
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